PDB entry 6esc

View 6esc on RCSB PDB site
Description: Crystal structure of Pseudorabies virus glycoprotein B
Class: viral protein
Keywords: herpesvirus, fusion protein, class III, viral entry, VIRAL PROTEIN
Deposited on 2017-10-20, released 2017-11-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Envelope glycoprotein B
    Species: Suid alphaherpesvirus 1 [TaxId:10345]
    Gene: UL27, gB
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6esca_
  • Heterogens: NAG, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6escA (A:)
aaavtraasasptpvpgspgltpndvsaeasleeieaftpgpseapdgeygdldartavr
aaaterdrfyvcpppsgstvvrlepeqacpeysqgrnftegiavlfkeniaphkfkahiy
yknvivttvwsgstyaaitnrftdrvpvpvqeitdvidrrgkcvskaeyvrnnhkvtafd
rdenpvevdlrpsrlnalgtrgwhttndtytkigaagfyhtgtsvnciveevearsvypy
dsfalstgdivymspfyglregahgehigyapgrfqqvehyypidldsrlrasesvtrnf
lrtphftvawdwapktrrvcslakwreaeemirdetrdgsfrftsralgasfvsdvtqld
lqrvhlgdcvlreaseaidaiyrrrynnthvlagdrpevylarggfvvafrplisnelaq
lyarelerlglagvvgpaspaaarrarrspgpagtpeppavngtghlrittgsaefarlq
ftydhiqahvndmlgriatawcelqnkdrtlwsemsrlnpsavataalgqrvsarmlgdv
maisrcvevrggvyvqnsmrvpgergtcysrplvtfehngtgviegqlgddnellisrdl
iepctgnhrryfklgsgyvyyedysyvrmvevpetistrvtlnltlledreflplevytr
eeladtglldyseiqrrnqlhalkfydidrvvkvdhnvvsrfesddddkagwshpqfekg
ggsgggsgggswshpqfek

    Sequence, based on observed residues (ATOM records): (download) 
    >6escA (A:)
rtavraaaterdrfyvcpppsgstvvrlepeqacpeysqgrnftegiavlfkeniaphkf
kahiyyknvivttvwsgstyaaitnrftdrvpvpvqeitdvidrrgkcvskaeyvrnnhk
vtafdrdenpvevdlrpsrlnalgtrgwhttndtytkigaagfyhtgtsvnciveevear
svypydsfalstgdivymspfyglregahgehigyapgrfqqvehyypidldsrlrases
vtrnflrtphftvawdwapktrrvcslakwreaeemirdetrdgsfrftsralgasfvsd
vtqldlqrvhlgdcvlreaseaidaiyrrrynnthvlagdrpevylarggfvvafrplis
nelaqghlrittgsaefarlqftydhiqahvndmlgriatawcelqnkdrtlwsemsrln
psavataalgqrvsarmlgdvmaisrcvevrggvyvqnsmrvpgergtcysrplvtfehn
gtgviegqlgddnellisrdliepctgnhrryfklgsgyvyyedysyvrmvevpetistr
vtlnltlledreflplevytreeladtglldyseiqrrnqlhalkfydidrvvk