PDB entry 6es4

View 6es4 on RCSB PDB site
Description: a cryptic rna-binding domain mediates syncrip recognition and exosomal partitioning of mirna targets
Deposited on 2017-10-19, released 2018-03-07
The last revision was dated 2018-03-07, with a file datestamp of 2018-03-02.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Syncrip, isoform K
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: Syp, AI945337, anon-WO0118547.613, DmelCG17838, l(3)03806, syp, CG17838, Dmel_CG17838
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Syncrip, isoform K
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: Syp, AI945337, anon-WO0118547.613, DmelCG17838, l(3)03806, syp, CG17838, Dmel_CG17838
    Database cross-references and differences (RAF-indexed):
  • Heterogens: SO4, EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6es4A (A:)
gertedypklleygldkkvagkldeiyktgklahaelderaldalkefpvdgalnvlgqf
lesnlehvsnksaylcgvmktyrqksrasqqgvaapatvkgpdedkikkilertgytldv
ttgqrkyggppphwegnvpgngcevfcgkipkdmyedeliplfencgiiwdlrlmmdpmt
gtnrgyafvtftnreaavnavrqldnheikpgkclkinisvp

    Sequence, based on observed residues (ATOM records):
    >6es4A (A:)
gertedypklleygldkkvagkldeiyktgklahaelderaldalkefpvdgalnvlgqf
lesnlehvsnksaylcgvmktyrqkgpdedkikkilertgytldvttgqrkyggppphwe
gnvpgngcevfcgkipkdmyedeliplfencgiiwdlrlmmdpmtgtnrgyafvtftnre
aavnavrqldnheikpgkclkinisvp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6es4B (B:)
gertedypklleygldkkvagkldeiyktgklahaelderaldalkefpvdgalnvlgqf
lesnlehvsnksaylcgvmktyrqksrasqqgvaapatvkgpdedkikkilertgytldv
ttgqrkyggppphwegnvpgngcevfcgkipkdmyedeliplfencgiiwdlrlmmdpmt
gtnrgyafvtftnreaavnavrqldnheikpgkclkinisvp

    Sequence, based on observed residues (ATOM records):
    >6es4B (B:)
gertedypklleygldkkvagkldeiyktgklahaelderaldalkefpvdgalnvlgqf
lesnlehvsnksaylcgvmktyrgpdedkikkilertgytldvttgqrkyggppphwegn
vpgngcevfcgkipkdmyedeliplfencgiiwdlrlmmdpmtgtnrgyafvtftnreaa
vnavrqldnheikpgkclkinisvp