PDB entry 6eny

View 6eny on RCSB PDB site
Description: structure of the human plc editing module
Deposited on 2017-10-07, released 2017-11-29
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: EM
Resolution: 5.8 Å
R-factor: N/A
AEROSPACI score: 0.01 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'B':
    Compound: Beta-2-microglobulin
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Tapasin
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Protein disulfide-isomerase A3
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: hla class I histocompatibility antigen, a-3 alpha chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: calreticulin
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P27797 (0-End)
      • conflict (145)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6enyB (B:)
    iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
    sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6enyC (C:)
    gpaviecwfvedasgkglakrpgalllrqgpgeppprpdldpelylsvhdpagalqaafr
    ryprgapaphcemsrfvplpasakwasgltpaqncpraldgawlmvsisspvlslssllr
    pqpepqqepvlitmatvvltvlthtpaprvrlgqdalldlsfaympptseaasslapgpp
    pfglewrrqhlgkghlllaatpglngqmpaaqegavafaawdddepwgpwtgngtfwlpr
    vqpfqegtylatihlpylqgqvtlelavykppkvslmpatlaraapgeappellclvshf
    ypsgglevewelrggpggrsqkaegqrwlsalrhhsdgsvslsghlqpppvtteqhgary
    acrihhpslpasgrsaevtlevaglsgpsledsvglflsaflllglfkalgwaavylstc
    kdskkkae
    

    Sequence, based on observed residues (ATOM records):
    >6enyC (C:)
    gpaviecwfvedaglakrpgallppprpdldpelylsvhdpagalqaafrryprgapaph
    cemsrfvplpasakwasgltpaqncpraldgawlmvsisspvlslssllrpqpepqqepv
    litmatvvltvlthtpaprvrlgqdalldlsfaympptspgpppfglewrrqhlgkghll
    laatpglngqmpaaqegavafaawdddepwgpwtgngtfwlprvqpfqegtylatihlpy
    lqgqvtlelavykppkvslmpatlaraapgeappellclvshfypsgglevewelrggpg
    grsqkaegqrwlsalrhhsdgsvslsghlqpppvtteqhgaryacrihhpslpasgrsae
    vtle
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6enyD (D:)
    sdvleltddnfesrisdtgsaglmlveffapwcghckrlapeyeaaatrlkgivplakvd
    ctantntcnkygvsgyptlkifrdgeeagaydgprtadgivshlkkqagpasvplrteee
    fkkfisdkdasivgffddsfseahseflkaasnlrdnyrfahtnveslvneyddngegii
    lfrpshltnkfedktvayteqkmtsgkikkfiqenifgicphmtednkdliqgkdlliay
    ydvdyeknakgsnywrnrvmmvakkfldaghklnfavasrktfshelsdfglestageip
    vvairtakgekfvmqeefsrdgkalerflqdyfdgnlkrylksepipesndgpvkvvvae
    nfdeivnnenkdvliefyapwcghcknlepkykelgeklskdpniviakmdatandvpsp
    yevrgfptiyfspankklnpkkyeggrelsdfisylqreatnppviqeekpkkkkkaqed
    l
    

    Sequence, based on observed residues (ATOM records):
    >6enyD (D:)
    sdvleltddnfesrisdglmlveffapwcghckrlapeyeaaatrlkgivplakvdctan
    tntcnkygvsgyptlkifrdgeeagaydgprtadgivshlkkqagpasvplreeefkkfi
    sdkdasivgffddsfseahseflkaasnlrdnyrfahtnveslvneyddngegiilfrps
    hltnkfedktvayteqkmtsgkikkfiqenifgicphmtednkdliqgkdlliayydvdy
    eknakgsnywrnrvmmvakkfldaghklnfavasrktfshelsdfglestageipvvair
    takgekfvmqeefsrdgkalerflqdyfdgnlkrylksepipesndgpvkvvvaenfdei
    vnnenkdvliefyapwcghcknlepkykelgeklskdpniviakmdatandvpspyevrg
    fptiyfspankklnpkkyeggrelsdfisylqreatnppvi
    

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6enyF (F:)
    gshsmryfftsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
    dqetrnvkaqsqtdrvdlgtlrgyynqseagshtiqimygcdvgsdgrflrgyrqdaydg
    kdyialnedlrswtaadmaaqitkrkweaaheaeqlrayldgtcvewlrrylengketlq
    rtdppkthmthhpisdheatlrcwalgfypaeitltwqrdgedqtqdtelvetrpagdgt
    fqkwaavvvpsgeeqrytchvqheglpkpltlrwelssqptipivgiiaglvllgavitg
    avvaavmwrrkssdrkggsytqaassdsaqgsdvsltackv
    

    Sequence, based on observed residues (ATOM records):
    >6enyF (F:)
    gshsmryfftsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
    dqetrnvkaqsqtdrvdlgtlrgyynqseagshtiqimygcdvgsdgrflrgyrqdaydg
    kdyialnedlrswtaadmaaqitkrkweaaheaeqlrayldgtcvewlrrylengketlq
    rtdppkthmthhpisdheatlrcwalgfypaeitltwqrdgedqtqdtelvetrpagdgt
    fqkwaavvvpsgeeqrytchvqheglpkpltlrw
    

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6enyG (G:)
    epavyfkeqfldgdgwtsrwieskhksdfgkfvlssgkfygdeekdkglqtsqdarfyal
    sasfepfsnkgqtlvvqftvkheqnidcgggyvklfpnsldqtdmhgdseynimfgpdic
    gpgtkkvhvifnykgknvlinkdirskddefthlytlivrpdntyevkidnsqvesgsle
    ddwdflppkkikdpdaskpedwderakiddptdskpedwdkpehipdpdakkpedwdeem
    dgeweppviqnpeykgewkprqidnpdykgtwihpeidnpeyspdpsiyaydnfgvlgld
    lwqvksgtifdnflitndeayaeefgnetwgvtkaaekqmkdkqdeeqrlkeeeedkkrk
    eeeeaedkeddedkdedeedeedkeedeeedvpgqakdel
    

    Sequence, based on observed residues (ATOM records):
    >6enyG (G:)
    epavyfkeqfldgdgwtsrwieskhksdfgkfvlssgkfygdeekdkglqtsqdarfyal
    sasfepfsnkgqtlvvqftvkheqnidcgggyvklfpnsldqtdmhgdseynimfgpdic
    gpgtkkvhvifnykgknvlinkdirskddefthlytlivrpdntyevkidnsqvesgsle
    ddwdflkkikdpdaskpedwdeakiddptdskpedwdkpehipdpdakkpedwdeemdge
    weppviqnpeykgewkprqidndykgtwihpeidnpeyspdpsiyaydnfgvlgldlwqv
    ksgtifdnflitndeayaeefgnetwgvtkaaekqmkdkqdeeqrlkeeeedkkrkeeee
    aedke