PDB entry 6en3

View 6en3 on RCSB PDB site
Description: crystal structure of full length endos from streptococcus pyogenes in complex with g2 oligosaccharide.
Deposited on 2017-10-04, released 2018-06-13
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Endo-beta-N-acetylglucosaminidase F2,Multifunctional-autoprocessing repeats-in-toxin
    Species: Vibrio cholerae [TaxId:666]
    Gene: rtxA, rtx, VC_1451
    Database cross-references and differences (RAF-indexed):
    • Uniprot J7M8R4
      • engineered mutation (197)
      • engineered mutation (199)
    • Uniprot Q9KS12
  • Heterogens: CA, NI, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6en3A (A:)
meektvqvqkglpsidslhylsenskkefkeelskagqesqkvkeilakaqqadkqaqel
akmkipekipmkplhgplyggyfrtwhdktsdptekdkvnsmgelpkevdlafifhdwtk
dyslfwkelatkhvpklnkqgtrvirtipwrflaggdnsgiaedtskypntpegnkalak
aivdeyvykynldgldvavlhdsipkvdkkedtagversiqvfeeigkligpkgvdksrl
fimdstymadknpliergapyinlllvqvygsqgekggwepvsnrpektmeerwqgysky
irpeqymigfsfyeenaqegnlwydinsrkdedkangintditgtraeryarwqpktggv
kggifsyaidrdgvahqpkkyakqkefkdatdnifhsdysvskalktvmlkdksydlide
kdfpdkalreavmaqvgtrkgdlerfngtlrldnpaiqsleglnkfkklaqldliglsri
tkldrsvlpanmkpgkdtletvletykkdnkeepatippvslkvsgltglkeldlsgfdr
etlagldaatltslekvdisgnkldlapgtenrqifdtmlstisnhvgsneqtvkfdkqk
ptghypdtygktslrlpvanekvdlqsqllfgtvtnqgtlinseadykayqnhkiagrsf
vdsnyhynnfkvsyenytvkvtdstlgtttdktlatdkeetykvdffspadktkavhtak
vivgdektmmvnlaegatviggsadpvnarkvfdgqlgsetdnislgwdskqsiifklke
dglikhwrffndsarnpettnkpiqeaslqifnikdynldnllenpnkfddekywitvdt
ysaqgeratafsntlnnitskywrvvfdtkgdrysspvvpelqilgyplpnadtimktvt
takelsqqkdkfsqkmldelkikemaletslnskifdvtainanagvlkdciekrqllkk
lgsgkilhnqnvnswgpitvtpttdggetrfdgqiivqmendpvvakaaanlagkhaess
vvvqldsdgnyrvvygdpskldgklrwqlvghgrdhsetnntrlsgysadelavklakfq
qsfnqaeninnkpdhisivgcslvsddkqkgfghqfinamdanglrvdvsvrsselavde
agrkhtkdangdwvqkaennkvslswdaqleggsggsgnsghhhhhhhhhh

    Sequence, based on observed residues (ATOM records):
    >6en3A (A:)
psidslhylsenskkefkeelskagqesqkvkeilakaqqadkqaqelakmkipekipmk
plhgplyggyfrtwhdktsdptekdkvnsmgelpkevdlafifhdwtkdyslfwkelatk
hvpklnkqgtrvirtipwrflaggdnsgiaedtskypntpegnkalakaivdeyvykynl
dgldvavlhdsipkvdkkedtagversiqvfeeigkligpkgvdksrlfimdstymadkn
pliergapyinlllvqvygsqgekggwepvsnrpektmeerwqgyskyirpeqymigfsf
yeenaqegnlwydinsrkdedkangintditgtraeryarwqpktggvkggifsyaidrd
gvahqpkkyakqkefkdatdnifhsdysvskalktvmlkdksydlidekdfpdkalreav
maqvgtrkgdlerfngtlrldnpaiqsleglnkfkklaqldliglsritkldrsvlpanm
kpgkdtletvletyepatippvslkvsgltglkeldlsgfdretlagldaatltslekvd
isgnkldlapgtenrqifdtmlstisnhvgsneqtvkfdkqkptghypdtygktslrlpv
anekvdlqsqllfgtvtnqgtlinseadykayqnhkiagrsfvdsnyhynnfkvsyenyt
vkvtdstlgtttdktlatdkeetykvdffspadktkavhtakvivgdektmmvnlaegat
viggsadpvnarkvfdgqlgsetdnislgwdskqsiifklkedglikhwrffndsarnpe
ttnkpiqeaslqifnikdynldnllenpnkfddekywitvdtysaqgeratafsntlnni
tskywrvvfdtkgdrysspvvpelqilgyplpnadtimktvttakelsqqkdkfsqkmld
elkikemaletslnskifdvtainanagvlkdci