PDB entry 6ems

View 6ems on RCSB PDB site
Description: crystal structure of dual specific trm10 construct from thermococcus kodakaraensis.
Deposited on 2017-10-03, released 2018-06-13
The last revision was dated 2018-07-25, with a file datestamp of 2018-07-20.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: tRNA (guanine(9)-/adenine(9)-N1)-methyltransferase
    Species: Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) [TaxId:311400]
    Gene: TK0422
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5JD38 (20-End)
      • expression tag (19)
      • engineered mutation (96)
      • engineered mutation (139)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6emsA (A:)
mgsshhhhhhssglvprgshmktladvfrealkekgissigtlskrfrksknklqdiaie
ivhgkgavfrvpektavawdlngnrvdgsyyayaplamrekfepvltpeelreklpdwpy
fiidlyhwdkhtqkekgkialqvnqsygllrdyftgselavtwaneefremfhgpldrit
tyggptseflkenginevvlldpwaeevlsekdfdvkafiiggivdtggnkkkttpkige
elesagikvrrrkivlrgdvvgvpdrinrilgiilkmmvegksmdeavyemqeplharwr
lrkelpkratrymvegkvyrvvekelfdeyskwlkirwedfvkvlreldlvalerkrihh
lnki

    Sequence, based on observed residues (ATOM records):
    >6emsA (A:)
hmktladvfrealkekgissigtlskrfrksknklqdiaieivhgkgavfrvpektavaw
dlngnrvdgsyyayaplamrekfepvltpeelreklpdwpyfiidlyhwdkhtqkekgki
alqvnqsygllrdyftgselavtwaneefremfhgpldrittyggptseflkenginevv
lldpwaeevlsekdfdvkafiiggigeelesagikvrrrkivdrinrilgiilkmmvegk
smde