PDB entry 6emj

View 6emj on RCSB PDB site
Description: FAB Fragment. AbVance: Increasing our knowledge of antibody structural space to enable faster and better decision making in antibody drug discovery
Class: immune system
Keywords: ANTIBODY, fAB FRAGMENT, AbVance project, Pistoia Alliance, immune system
Deposited on 2017-10-02, released 2017-11-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-08, with a file datestamp of 2017-11-03.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6EMJ (0-End)
    Domains in SCOPe 2.08: d6emja_
  • Chain 'B':
    Compound: Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6EMJ (0-End)
    Domains in SCOPe 2.08: d6emjb1, d6emjb2
  • Chain 'H':
    Compound: Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6EMJ (0-End)
    Domains in SCOPe 2.08: d6emjh_
  • Chain 'L':
    Compound: Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6EMJ (0-End)
    Domains in SCOPe 2.08: d6emjl1, d6emjl2
  • Heterogens: NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6emjA (A:)
evqlvesggglvqpggslrlscatsgfdfsrywmswvrqapgkglvwigevnpdstsiny
tpslkdqftisrdnakntlylqmnslraedtavyyctrpnyygsryhyyamdywgqgtlv
tvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpav
lqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepksc

    Sequence, based on observed residues (ATOM records): (download) 
    >6emjA (A:)
evqlvesggglvqpggslrlscatsgfdfsrywmswvrqapgkglvwigevnpdstsiny
tpslkdqftisrdnakntlylqmnslraedtavyyctrpnyyyamdywgqgtlvtvssas
tkgpsvfplapsgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslssv
vtvpssslgtqtyicnvnhkpsntkvdkrvep

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6emjB (B:)
diqmtqspsslsasvgdrvtitcrasqdinnylnwyqqkpgkapklliyytsrlhsgvps
rfsgsgsgtdftftisslqpediatyycqqgstlpftfgqgtkleikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >6emjB (B:)
diqmtqspsslsasvgdrvtitcrasqdinnylnwyqqkpgkapklliyytsrlhsgvps
rfsgsgsgtdftftisslqpediatyycqqgstlpftfgqgtkleikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrge

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6emjH (H:)
evqlvesggglvqpggslrlscatsgfdfsrywmswvrqapgkglvwigevnpdstsiny
tpslkdqftisrdnakntlylqmnslraedtavyyctrpnyygsryhyyamdywgqgtlv
tvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpav
lqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepksc

    Sequence, based on observed residues (ATOM records): (download) 
    >6emjH (H:)
evqlvesggglvqpggslrlscatsgfdfsrywmswvrqapgkglvwigevnpdstsiny
tpslkdqftisrdnakntlylqmnslraedtavyyctrpnyygsryhyyamdywgqgtlv
tvssastkgpsvfplapsgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgl
yslssvvtvpssslgtqtyicnvnhkpsntkvdkrvep

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >6emjL (L:)
diqmtqspsslsasvgdrvtitcrasqdinnylnwyqqkpgkapklliyytsrlhsgvps
rfsgsgsgtdftftisslqpediatyycqqgstlpftfgqgtkleikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >6emjL (L:)
diqmtqspsslsasvgdrvtitcrasqdinnylnwyqqkpgkapklliyytsrlhsgvps
rfsgsgsgtdftftisslqpediatyycqqgstlpftfgqgtkleikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnr