PDB entry 6ejp

View 6ejp on RCSB PDB site
Description: yersinia yscu c-terminal fragment in complex with a synthetic compound
Deposited on 2017-09-22, released 2018-10-10
The last revision was dated 2018-10-10, with a file datestamp of 2018-10-05.
Experiment type: XRAY
Resolution: 2.48 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Yop proteins translocation protein U
    Species: Yersinia pestis [TaxId:632]
    Gene: yscU, YPCD1.47, y5031, y0034, YP_pCD36
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Yop proteins translocation protein U
    Species: Yersinia pestis [TaxId:632]
    Gene: yscU, YPCD1.47, y5031, y0034, YP_pCD36
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Yop proteins translocation protein U
    Species: Yersinia pestis [TaxId:632]
    Gene: yscU, YPCD1.47, y5031, y0034, YP_pCD36
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Yop proteins translocation protein U
    Species: Yersinia pestis [TaxId:632]
    Gene: yscU, YPCD1.47, y5031, y0034, YP_pCD36
    Database cross-references and differences (RAF-indexed):
  • Heterogens: PO4, CL, B8E, NA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ejpA (A:)
gplgsikelkmskdeikreykemegspeikskrrqfhqeiqsrnmrenvkrssvvvan

    Sequence, based on observed residues (ATOM records):
    >6ejpA (A:)
ikelkmskdeikreykemegspeikskrrqfhqeiqsrnmrenvkrssvvvan

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ejpB (B:)
gplgsikelkmskdeikreykemegspeikskrrqfhqeiqsrnmrenvkrssvvvan

    Sequence, based on observed residues (ATOM records):
    >6ejpB (B:)
elkmskdeikreykemegspeikskrrqfhqeiqsrnmrenvkrssvvvan

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ejpC (C:)
pthiaigilykrgetplplvtfkytdaqvqtvrkiaeeegvpilqriplaralywdalvd
hyipaeqieataevlrwlerqniekqhseml

    Sequence, based on observed residues (ATOM records):
    >6ejpC (C:)
pthiaigilykrgetplplvtfkytdaqvqtvrkiaeeegvpilqriplaralywdalvd
hyipaeqieataevlrwlerqniekqh

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ejpD (D:)
pthiaigilykrgetplplvtfkytdaqvqtvrkiaeeegvpilqriplaralywdalvd
hyipaeqieataevlrwlerqniekqhseml

    Sequence, based on observed residues (ATOM records):
    >6ejpD (D:)
pthiaigilykrgetplplvtfkytdaqvqtvrkiaeeegvpilqriplaralywdalvd
hyipaeqieataevlrwlerqniekqhsem