PDB entry 6eja

View 6eja on RCSB PDB site
Description: human xylosyltransferase 1 in complex with peptide qeeeysgggqgg
Deposited on 2017-09-20, released 2018-05-02
The last revision was dated 2018-06-13, with a file datestamp of 2018-06-08.
Experiment type: XRAY
Resolution: 1.94 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Xylosyltransferase 1
    Species: Homo sapiens [TaxId:9606]
    Gene: XYLT1, XT1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Protein AMBP
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02760
      • engineered mutation (4)
  • Heterogens: NA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ejaA (A:)
    aplvhhhhhhaldenlyfqgaladvsrppharktggsspetkydqppkcdisgkeaisal
    srakskhcrqeigetycrhklgllmpekvtrfcplegkanknvqwdedsveympanpvri
    afvlvvhgrasrqlqrmfkaiyhkdhfyyihvdkrsnylhrqvlqvsrqysnvrvtpwrm
    atiwggasllstylqsmrdllemtdwpwdffinlsaadypirtndqlvaflsryrdmnfl
    kshgrdnarfirkqgldrlflecdahmwrlgdrripegiavdggsdwfllnrrfveyvtf
    stddlvtkmkqfysytllpaesffhtvlensphcdtmvdnnlritnwnrklgckcqykhi
    vdwcgcspndfkpqdfhrfqqtarptffarkfeavvnqeiigqldyylygnypagtpglr
    sywenvydepdgihslsdvtltlyhsfarlglrraetslhtdgenscryypmghpasvhl
    yfladrfqgflikhhatnlavskletletwvmpkkvfkiasppsdfgrlqfsevgtdwda
    kerlfrnfggllgpmdepvgmqkwgkgpnvtvtviwvdpvnviaatydiliestaefthy
    kpplnlplrpgvwtvkilhhwvpvaetkflvapltfsnrqpikpeealklhngplrnaym
    eqsfqslnpvlslpinpaqveqarrnaastgtalegwldslvggmwtamdicatgptacp
    vmqtcsqtawssfspdpkselgavkpdgrlr
    

    Sequence, based on observed residues (ATOM records):
    >6ejaA (A:)
    qppkcdisgkeaisalsrakskhcrqeigetycrhklgllmpekvtrfcplegkanknsv
    eympanpvriafvlvvhgrasrqlqrmfkaiyhkdhfyyihvdkrsnylhrqvlqvsrqy
    snvrvtpwrmatiwggasllstylqsmrdllemtdwpwdffinlsaadypirtndqlvaf
    lsryrdmnflkshgrdnarfirkqgldrlflecdahmwrlgdrripegiavdggsdwfll
    nrrfveyvtfstddlvtkmkqfysytllpaesffhtvlensphcdtmvdnnlritnwnrk
    lgckcqykhivdwcgcspndfkpqdfhrfqqtarptffarkfeavvnqeiigqldyylyg
    nypagtpglrsywenvydepdgihslsdvtltlyhsfarlglrraetslhtdgenscryy
    pmghpasvhlyfladrfqgflikhhatnlavskletletwvmpkkvfkiasgrlqfsevg
    tdwdakerlfrnfggllgpmdepvgmqkwgkgpnvtvtviwvdpvnviaatydiliesta
    efthykpplnlplrpgvwtvkilhhwvpvaetkflvapltfsnrqpikpeealklhngpl
    rnaymeqsfqslnpvlslpinpaqveqarrnaastgtalegwldslvggmwtamdicatg
    ptacpvmqtcsqtawssfspdpkselgavkpdgrlr
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ejaB (B:)
    qeeeysgggqgg
    

    Sequence, based on observed residues (ATOM records):
    >6ejaB (B:)
    eysgggq