PDB entry 6ej5

View 6ej5 on RCSB PDB site
Description: a conserved structural element in the rna helicase upf1 regulates its catalytic activity in an isoform-specific manner
Deposited on 2017-09-20, released 2018-01-24
The last revision was dated 2018-04-04, with a file datestamp of 2018-03-29.
Experiment type: XRAY
Resolution: 3.34 Å
R-factor: N/A
AEROSPACI score: 0.1 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Regulator of nonsense transcripts 1
    Species: Homo sapiens [TaxId:9606]
    Gene: UPF1, KIAA0221, RENT1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q92900 (6-End)
      • expression tag (5)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ej5A (A:)
    gaadsmryedayqyqnifgplvkleadydkklkesqtqdnitvrwdlglnkkriayftlp
    ktdsgnedlviiwlrdmrlmqgdeiclrykgdlaplwkgighvikvpdnygdeiaielrs
    svgapvevthnfqvdfvwkstsfdrmqsalktfavdetsvsgyiyhkllghevedviikc
    qlpkrftaqglpdlnhsqvyavktvlqrplsliqgppgtgktvtsativyhlarqgngpv
    lvcapsniavdqltekihqtglkvvrlcaksreaidspvsflalhnqirnmdsmpelqkl
    qqlkdetgelssadekryralkrtaerellmnadvicctcvgagdprlakmqfrsilide
    stqatepecmvpvvlgakqlilvgdhcqlgpvvmckkaakaglsqslferlvvlgirpir
    lqvqyrmhpalsafpsnifyegslqngvtaadrvkkgfdfqwpqpdkpmffyvtqgqeei
    assgtsylnrteaanvekittkllkagakpdqigiitpyegqrsylvqymqfsgslhtkl
    yqeveiasvdafqgrekdfiilscvranehqgigflndprrlnvaltrarygviivgnpk
    alskqplwnhllnyykeqkvlvegplnnlreslmqfs
    

    Sequence, based on observed residues (ATOM records):
    >6ej5A (A:)
    mryedayqyqnifgplvkleadydkklkesqtqdnitvrwdlglnkkriayftliwlrdm
    rlmqgdeiclrykgdlaplwkgighvikvpdnyiaielrssvgapvevthnfqvdfvwks
    tsfdrmqsalktfavdetsvsgyiyhkllghevedviikcqlpkrftaqglpdlnhsqvy
    avktvlqrplsliqgppgtgktvtsativyhlarqgngpvlvcapsniavdqltekihqt
    glkvvrlcaksrepvsflalhnqirnmdsmpelqklqqlkdessadekryralkrtaere
    llmnadvicctcvgagdprlakmqfrsilidestqatepecmvpvvlgakqlilvgdhcq
    lgpvvmckkaakaglsqslferlvvlgirpirlqvqyrmhpalsafpsnifyegslqngv
    taadrvkfdfqwpqpdkpmffyvtqgqeeiassgtsylnrteaanvekittkllkagakp
    dqigiitpyegqrsylvqymqsgslhtklyqeveiasvdafqgrekdfiilscvranehg
    flndprrlnvaltrarygviivgnpkalskqplwnhllnyykeqkvlvegplnnlresl