PDB entry 6eib

View 6eib on RCSB PDB site
Description: structure of the active ggeef domain of a diguanylate cyclase from vibrio cholerae.
Deposited on 2017-09-19, released 2018-10-10
The last revision was dated 2020-04-29, with a file datestamp of 2020-04-24.
Experiment type: XRAY
Resolution: 1.94 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Sensory box/GGDEF family protein
    Species: Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) [TaxId:345073]
    Gene: VC0395_0300
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Sensory box/GGDEF family protein
    Species: Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) [TaxId:345073]
    Gene: VC0395_0300
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Sensory box/GGDEF family protein
    Species: Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) [TaxId:345073]
    Gene: VC0395_0300
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Sensory box/GGDEF family protein
    Species: Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) [TaxId:345073]
    Gene: VC0395_0300
    Database cross-references and differences (RAF-indexed):
  • Heterogens: SO4, EDO, ACT, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6eibA (A:)
gpsltqlcnrrklwadfraafarakrlrqplscisididnfklindqfghdkgdevlcfl
aklfqsvisdhhfcgrvggeefiivlenthvetafhlaeqirqrfaehpffeqnehiylc
agvsslhhgdhdiadiyrrsdqalykakrngrnrcciyrqste

    Sequence, based on observed residues (ATOM records):
    >6eibA (A:)
sltqlcnrrklwadfraafarakrlrqplscisididnfklindqfghdkgdevlcflak
lfqsvisdhhfcgrvggeefiivlenthvetafhlaeqirqrfaehpffeqnehiylcag
vsslhhgdhdiadiyrrsdqalykakrngrnrcciyrqs

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6eibB (B:)
gpsltqlcnrrklwadfraafarakrlrqplscisididnfklindqfghdkgdevlcfl
aklfqsvisdhhfcgrvggeefiivlenthvetafhlaeqirqrfaehpffeqnehiylc
agvsslhhgdhdiadiyrrsdqalykakrngrnrcciyrqste

    Sequence, based on observed residues (ATOM records):
    >6eibB (B:)
ltqlcnrrklwadfraafarakrlrqplscisididnfklindqfghdkgdevlcflakl
fqsvisdhhfcgrvggeefiivlenthvetafhlaeqirqrfaehpffeqnehiylcagv
sslhhgdhdiadiyrrsdqalykakrngrnrcciyrqste

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6eibC (C:)
gpsltqlcnrrklwadfraafarakrlrqplscisididnfklindqfghdkgdevlcfl
aklfqsvisdhhfcgrvggeefiivlenthvetafhlaeqirqrfaehpffeqnehiylc
agvsslhhgdhdiadiyrrsdqalykakrngrnrcciyrqste

    Sequence, based on observed residues (ATOM records):
    >6eibC (C:)
tqlcnrrklwadfraafarakrlrqplscisididnfklindqfghdkgdevlcflaklf
qsvisdhhfcgrvggeefiivlenthvetafhlaeqirqrfaehpffeqnehiylcagvs
slhhgdhdiadiyrrsdqalykakrngrnrcciyrqs

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6eibD (D:)
gpsltqlcnrrklwadfraafarakrlrqplscisididnfklindqfghdkgdevlcfl
aklfqsvisdhhfcgrvggeefiivlenthvetafhlaeqirqrfaehpffeqnehiylc
agvsslhhgdhdiadiyrrsdqalykakrngrnrcciyrqste

    Sequence, based on observed residues (ATOM records):
    >6eibD (D:)
qlcnrrklwadfraafarakrlrqplscisididnfklindqfghdkgdevlcflaklfq
svisdhhfcgrvggeefiivlenthvetafhlaeqirqrfaehpffeqnehiylcagvss
lhhgdhdiadiyrrsdqalykakrngrnrcciyrqs