PDB entry 6eho

View 6eho on RCSB PDB site
Description: dimer of the sortilin vps10p domain at low ph
Deposited on 2017-09-14, released 2017-12-06
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 3.5 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Sortilin
    Species: Homo sapiens [TaxId:9606]
    Gene: SORT1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q99523
      • conflict (616)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ehoA (A:)
    qdrldappppaaplprwsgpigvswglraaaaggafprggrwggsapgedeecgrvrdfv
    aklannthqhvfddlrgsvslswvgdstgvilvlttfhvplvimtfgqsklyrsedygkn
    fkditdlinntfirtefgmaigpensgkvvltaevsggsrggrifrssdfaknfvqtdlp
    fhpltqmmyspqnsdyllalstenglwvsknfggkweeihkavclakwgsdntiffttya
    ngsckadlgalelwrtsdlgksfktigvkiysfglggrflfasvmadkdttrrihvstdq
    gdtwsmaqlpsvgqeqfysilaanddmvfmhvdepgdtgfgtiftsddrgivysksldrh
    lytttggetdftnvtslrgvyitsvlsednsiqtmitfdqggrwthlrkpensecdatak
    nknecslhihasysisqklnvpmaplsepnavgiviahgsvgdaisvmvpdvyisddggy
    swtkmlegphyytildsggiivaiehssrpinvikfstdegqcwqtytftrdpiyftgla
    sepgarsmnisiwgftesfltsqwvsytidfkdilernceekdytiwlahstdpedyedg
    cilgykeqflrlrkssmcqngrdyvvtkqpsiclcsledflcdfgyyrpendskcveqpe
    lkghdlefclygreehlttngyrkipgdkcqggvnpvrevkdlkkkctsnflspekqnsk
    sns
    

    Sequence, based on observed residues (ATOM records):
    >6ehoA (A:)
    ecgrvrdfvaklannthqhvfddlrgsvslswvgdstgvilvlttfhvplvimtfgqskl
    yrsedygknfkditdlinntfirtefgmaigpensgkvvltaevsggsrggrifrssdfa
    knfvqtdlpfhpltqmmyspqnsdyllalstenglwvsknfggkweeihkavclakwgsd
    ntiffttyangsckadlgalelwrtsdlgksfktigvkiysfglggrflfasvrrihvst
    dqgdtwsmaqlpsvgqeqfysilaanddmvfmhvdepgdtgfgtiftsddrgivysksld
    rhlytttggetdftnvtslrgvyitsvlsednsiqtmitfdqggrwthlrkpensecdat
    aknknecslhihasysisqklnvpmaplsepnavgiviahgsvgdaisvmvpdvyisddg
    gyswtkmlegphyytildsggiivaiehssrpinvikfstdegqcwqtytftrdpiyftg
    lasepgarsmnisiwgftesfltsqwvsytidfkdilernceekdytiwlahstdpedye
    dgcilgykeqflrlrkssmcqngrdyvvtkqpsiclcsledflcdfgyyrpendskcveq
    pelkghdlefclygreehlttngyrkipgdkcqggvnpvcts