PDB entry 6ehm

View 6ehm on RCSB PDB site
Description: model of the ebola virus nucleocapsid subunit from recombinant virus- like particles
Deposited on 2017-09-13, released 2017-11-08
The last revision was dated 2019-12-04, with a file datestamp of 2019-11-29.
Experiment type: EM
Resolution: N/A
R-factor: N/A
AEROSPACI score: -0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nucleoprotein
    Species: Zaire ebolavirus (strain Mayinga-76) [TaxId:128952]
    Gene: NP
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: nucleoprotein
    Species: Zaire ebolavirus (strain Mayinga-76) [TaxId:128952]
    Gene: NP
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Membrane-associated protein VP24
    Species: Zaire ebolavirus (strain Mayinga-76) [TaxId:128952]
    Gene: VP24
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Membrane-associated protein VP24
    Species: Zaire ebolavirus (strain Mayinga-76) [TaxId:128952]
    Gene: VP24
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ehmA (A:)
mdsrpqkiwmapsltesdmdyhkiltaglsvqqgivrqrvipvyqvnnleeicqliiqaf
eagvdfqesadsfllmlclhhayqgdyklflesgavkyleghgfrfevkkrdgvkrleel
lpavssgknikrtlaampeeetteanagqflsfaslflpklvvgekaclekvqrqiqvha
eqgliqyptawqsvghmmvifrlmrtnflikfllihqgmhmvaghdandavisnsvaqar
fsgllivktvldhilqktergvrlhplartakvknevnsfkaalsslakhgeyapfarll
nlsgvnnlehglfpqlsaialgvatahgstlagvnvgeqyqqlreaateaekqlqqyaes
reldhlglddqekkilmnfhqkkneisfqqtnamvtlrkerlaklteaitaaslpktsgh
ydddddipfpgpindddnpghqdddptdsqdttipdvvvdpddgsygeyqsysengmnap
ddlvlfdldeddedtkpvpnrstkggqqknsqkgqhiegrqtqsrpiqnvpgphrtihha
sapltdndrrnepsgstsprmltpineeadplddaddetsslpplesddeeqdrdgtsnr
tptvappapvyrdhsekkelpqdeqqdqdhtqearnqdsdntqsehsfeemyrhilrsqg
pfdavlyyhmmkdepvvfstsdgkeytypdsleeeyppwltekeamneenrfvtldgqqf
ywpvmnhknkfmailqhhq

    Sequence, based on observed residues (ATOM records):
    >6ehmA (A:)
esdmdyhkiltaglsvqqgivrqrvipvyqvnnleeicqliiqafeagvdfqesadsfll
mlclhhayqgdyklflesgavkyleghgfrfevkkrdgvkrleellpavssgknikrtla
ampeeetteanagqflsfaslflpklvvgekaclekvqrqiqvhaeqgliqyptawqsvg
hmmvifrlmrtnflikfllihqgmhmvaghdandavisnsvaqarfsgllivktvldhil
qktergvrlhplartakvknevnsfkaalsslakhgeyapfarllnlsgvnnlehglfpq
lsaialgvatahgstlagvnvgeqyqqlreaateaekqlqqyaesreldhlglddqekki
lmnfhqkkneisfqqtnamvtlrkerlaks

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ehmB (B:)
mdsrpqkiwmapsltesdmdyhkiltaglsvqqgivrqrvipvyqvnnleeicqliiqaf
eagvdfqesadsfllmlclhhayqgdyklflesgavkyleghgfrfevkkrdgvkrleel
lpavssgknikrtlaampeeetteanagqflsfaslflpklvvgekaclekvqrqiqvha
eqgliqyptawqsvghmmvifrlmrtnflikfllihqgmhmvaghdandavisnsvaqar
fsgllivktvldhilqktergvrlhplartakvknevnsfkaalsslakhgeyapfarll
nlsgvnnlehglfpqlsaialgvatahgstlagvnvgeqyqqlreaateaekqlqqyaes
reldhlglddqekkilmnfhqkkneisfqqtnamvtlrkerlaklteaitaaslpktsgh
ydddddipfpgpindddnpghqdddptdsqdttipdvvvdpddgsygeyqsysengmnap
ddlvlfdldeddedtkpvpnrstkggqqknsqkgqhiegrqtqsrpiqnvpgphrtihha
sapltdndrrnepsgstsprmltpineeadplddaddetsslpplesddeeqdrdgtsnr
tptvappapvyrdhsekkelpqdeqqdqdhtqearnqdsdntqsehsfeemyrhilrsqg
pfdavlyyhmmkdepvvfstsdgkeytypdsleeeyppwltekeamneenrfvtldgqqf
ywpvmnhknkfmailqhhq

    Sequence, based on observed residues (ATOM records):
    >6ehmB (B:)
esdmdyhkiltaglsvqqgivrqrvipvyqvnnleeicqliiqafeagvdfqesadsfll
mlclhhayqgdyklflesgavkyleghgfrfevkkrdgvkrleellpavssgknikrtla
ampeeetteanagqflsfaslflpklvvgekaclekvqrqiqvhaeqgliqyptawqsvg
hmmvifrlmrtnflikfllihqgmhmvaghdandavisnsvaqarfsgllivktvldhil
qktergvrlhplartakvknevnsfkaalsslakhgeyapfarllnlsgvnnlehglfpq
lsaialgvatahgstlagvnvgeqyqqlreaateaekqlqqyaesreldhlglddqekki
lmnfhqkkneisfqqtnamvtlrkerlaks

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ehmC (C:)
makatgrynlispkkdlekgvvlsdlcnflvsqtiqgwkvywagiefdvthkgmallhrl
ktndfapawsmtrnlfphlfqnpnstiesplwalrvilaagiqdqlidqslieplagalg
lisdwllttntnhfnmrtqrvkeqlslkmlslirsnilkfinkldalhvvnyngllssie
igtqnhtiiitrtnmgflvelqepdksamnrmkpgpakfsllhestlkaftqgsstrmqs
lilefnsslai

    Sequence, based on observed residues (ATOM records):
    >6ehmC (C:)
mispkkdlekgvvlsdlcnflvsqtiqgwkvywagiefdvthkgmallhrlktndfapaw
smtrnlfphlfqnpnstiesplwalrvilaagiqdqlidqslieplagalglisdwlltt
ntnhfnmrtqrvkeqlslkmlslirsnilkfinkldalhvvnyngllssieigtqnhtii
itrtnmgflvelqepdksamnrmkpgpakfsllhestlkaft

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ehmD (D:)
makatgrynlispkkdlekgvvlsdlcnflvsqtiqgwkvywagiefdvthkgmallhrl
ktndfapawsmtrnlfphlfqnpnstiesplwalrvilaagiqdqlidqslieplagalg
lisdwllttntnhfnmrtqrvkeqlslkmlslirsnilkfinkldalhvvnyngllssie
igtqnhtiiitrtnmgflvelqepdksamnrmkpgpakfsllhestlkaftqgsstrmqs
lilefnsslai

    Sequence, based on observed residues (ATOM records):
    >6ehmD (D:)
mispkkdlekgvvlsdlcnflvsqtiqgwkvywagiefdvthkgmallhrlktndfapaw
smtrnlfphlfqnpnstiesplwalrvilaagiqdqlidqslieplagalglisdwlltt
ntnhfnmrtqrvkeqlslkmlslirsnilkfinkldalhvvnyngllssieigtqnhtii
itrtnmgflvelqepdksamnrmkpgpakfsllhestlkaft