PDB entry 6egu

View 6egu on RCSB PDB site
Description: structure of rvfv envelope protein gc in postfusion conformation in complex with 1,2-dipropionyl-sn-glycero-3-phosphocholine
Deposited on 2017-09-12, released 2017-11-01
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: rvfv envelope protein gc
    Species: Rift Valley fever virus [TaxId:11588]
    Database cross-references and differences (RAF-indexed):
    • Uniprot A2T087 (0-End)
      • engineered mutation (130)
  • Chain 'B':
    Compound: rvfv envelope protein gc
    Species: Rift Valley fever virus [TaxId:11588]
    Database cross-references and differences (RAF-indexed):
    • Uniprot A2T087 (0-End)
      • engineered mutation (130)
  • Chain 'C':
    Compound: rvfv envelope protein gc
    Species: Rift Valley fever virus [TaxId:11588]
    Database cross-references and differences (RAF-indexed):
    • Uniprot A2T087 (0-End)
      • engineered mutation (130)
  • Heterogens: NAG, 43Y, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6eguA (A:)
cseliqassrittcstegvntkcrlsgtaliragsvgaeaclmlkgvkedqtkflkiktv
sselscregqsywtgsfspkclssrrchlvgechvnrclswrdnetsaefsfvgesttmr
enkcfeqcgghgcgcfnvnpsclfvhtylqsvrkealrvfncidwvhkltleitdfdgsv
stidlgasssrftnwgsvslsldaegisgsnsfsfiespgkgyaivdepfseiprqgflg
eircnsessvlsahesclrapnlisykpmidqlecttnlidpfvvfergslpqtrndktf
aaskgnrgvqafskgsvqadltlmfdnfevdfvgaavscdaaflnltgcyscnagarvcl
sitstgtgtlsahnkdgslhivlpsengtkdqcqilhftvpeveeefmyscdgderpllv
kgtliaidpfddrreaggestvvnpksgswnffdwfsglmswfggplkdptgdykdddda
gpgwshpqfekgggsgggsgggswshpqfekgggsgggsgggswshpqfek

    Sequence, based on observed residues (ATOM records):
    >6eguA (A:)
cseliqassrittcstetkcrlsgtaliragsvgaeaclmlkgvkedqtkflkiktvsse
lscregqsywtgsfspkclssrrchlvgechvnrclswrdnetsaefsfvgesttmrenk
cfeqcgghgcgcfnvnpsclfvhtylqsvrkealrvfncidwvhkltleitdfdgsvsti
dlgasssrftnwgsvslsldaegisgsnsfsfiespgkgyaivdepfseiprqgflgeir
cnsessvlsahesclrapnlisykpmidqlecttnlidpfvvfergslpqtrndktfaas
kgnrgvqafskgsvqadltlmfdnfevdfvgaavscdaaflnltgcyscnagarvclsit
stgtgtlsahnkdgslhivlpsengtkdqcqilhftvpeveeefmyscdgderpllvkgt
liaidpfddrreaggestvvnpk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6eguB (B:)
cseliqassrittcstegvntkcrlsgtaliragsvgaeaclmlkgvkedqtkflkiktv
sselscregqsywtgsfspkclssrrchlvgechvnrclswrdnetsaefsfvgesttmr
enkcfeqcgghgcgcfnvnpsclfvhtylqsvrkealrvfncidwvhkltleitdfdgsv
stidlgasssrftnwgsvslsldaegisgsnsfsfiespgkgyaivdepfseiprqgflg
eircnsessvlsahesclrapnlisykpmidqlecttnlidpfvvfergslpqtrndktf
aaskgnrgvqafskgsvqadltlmfdnfevdfvgaavscdaaflnltgcyscnagarvcl
sitstgtgtlsahnkdgslhivlpsengtkdqcqilhftvpeveeefmyscdgderpllv
kgtliaidpfddrreaggestvvnpksgswnffdwfsglmswfggplkdptgdykdddda
gpgwshpqfekgggsgggsgggswshpqfekgggsgggsgggswshpqfek

    Sequence, based on observed residues (ATOM records):
    >6eguB (B:)
cseliqassrittcsttkcrlsgtaliragsvgaeaclmlkgvkedqtkflkiktvssel
scregqsywtgsfspkclssrrchlvgechvnrclswrdnetsaefsfvgesttmrenkc
feqcgghgcgcfnvnpsclfvhtylqsvrkealrvfncidwvhkltleitdfdgsvstid
lgasssrftnwgsvslsldaegisgsnsfsfiespgkgyaivdepfseiprqgflgeirc
nsessvlsahesclrapnlisykpmidqlecttnlidpfvvfergslpqtrndktfaask
gnrgvqafskgsvqadltlmfdnfevdfvgaavscdaaflnltgcyscnagarvclsits
tgtgtlsahnkdgslhivlpsengtkdqcqilhftvpeveeefmyscdgderpllvkgtl
iaidpfddrreaggestvvn

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6eguC (C:)
cseliqassrittcstegvntkcrlsgtaliragsvgaeaclmlkgvkedqtkflkiktv
sselscregqsywtgsfspkclssrrchlvgechvnrclswrdnetsaefsfvgesttmr
enkcfeqcgghgcgcfnvnpsclfvhtylqsvrkealrvfncidwvhkltleitdfdgsv
stidlgasssrftnwgsvslsldaegisgsnsfsfiespgkgyaivdepfseiprqgflg
eircnsessvlsahesclrapnlisykpmidqlecttnlidpfvvfergslpqtrndktf
aaskgnrgvqafskgsvqadltlmfdnfevdfvgaavscdaaflnltgcyscnagarvcl
sitstgtgtlsahnkdgslhivlpsengtkdqcqilhftvpeveeefmyscdgderpllv
kgtliaidpfddrreaggestvvnpksgswnffdwfsglmswfggplkdptgdykdddda
gpgwshpqfekgggsgggsgggswshpqfekgggsgggsgggswshpqfek

    Sequence, based on observed residues (ATOM records):
    >6eguC (C:)
cseliqassrittcstegvntkcrlsgtaliragsvgaeaclmlkgvkedqtkflkiktv
sselscregqsywtgsfspkclssrrchlvgechvnrclswrdnetsaefsfvgesttmr
enkcfeqcgghgcgcfnvnpsclfvhtylqsvrkealrvfncidwvhkltleitdfdgsv
stidlgasssrftnwgsvslsldaegisgsnsfsfiespgkgyaivdepfseiprqgflg
eircnsessvlsahesclrapnlisykpmidqlecttnlidpfvvfergslpqtrndktf
aaskrgvqafskgsvqadltlmfdnfevdfvgaavscdaaflnltgcyscnagarvclsi
tstgtgtlsahnkdgslhivlpsengtkdqcqilhftvpeveeefmyscdgderpllvkg
tliaidpfddrreaggestvvnpk