PDB entry 6egs

View 6egs on RCSB PDB site
Description: crystal structure of the galnac-t2 f104s mutant in complex with udp- galnac
Deposited on 2017-09-12, released 2018-04-11
The last revision was dated 2018-06-27, with a file datestamp of 2018-06-22.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Polypeptide N-acetylgalactosaminyltransferase 2
    Species: Homo sapiens [TaxId:9606]
    Gene: GALNT2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q10471 (6-End)
      • expression tag (3-5)
  • Chain 'B':
    Compound: Polypeptide N-acetylgalactosaminyltransferase 2
    Species: Homo sapiens [TaxId:9606]
    Gene: GALNT2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q10471 (6-End)
      • expression tag (5)
  • Heterogens: MN, UD2, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6egsA (A:)
kreaeakvrwpdfnqeayvggtmvrsgqdpyarnksnqvesdklrmdraipdtrhdqcqr
kqwrvdlpatsvvitfhnearsallrtvvsvlkkspphlikeiilvddysndpedgallg
kiekvrvlrndrreglmrsrvrgadaaqakvltfldshcecnehwlepllervaedrtrv
vspiidvinmdnfqyvgasadlkggfdwnlvfkwdymtpeqrrsrqgnpvapiktpmiag
glfvmdkfyfeelgkydmmmdvwggenleisfrvwqcggsleiipcsrvghvfrkqhpyt
fpggsgtvfarntrraaevwmdeyknfyyaavpsarnvpygniqsrlelrkklsckpfkw
ylenvypelrvpdhqdiafgalqqgtncldtlghfadgvvgvyechnaggnqewaltkek
svkhmdlcltvvdrapgsliklqgcrendsrqkweqiegnsklrhvgsnlcldsrtaksg
glsvevcgpalsqqwkftlnlqq

    Sequence, based on observed residues (ATOM records):
    >6egsA (A:)
aeakvrwpdfnqeayvggqvesdklrmdraipdtrhdqcqrkqwrvdlpatsvvitfhne
arsallrtvvsvlkkspphlikeiilvddysndpedgallgkiekvrvlrndrreglmrs
rvrgadaaqakvltfldshcecnehwlepllervaedrtrvvspiidvinmdnfqyvgas
adlkggfdwnlvfkwdymtpeqrrsrqgnpvapiktpmiagglfvmdkfyfeelgkydmm
mdvwggenleisfrvwqcggsleiipcsrvghvfrkqhpytfpvfarntrraaevwmdey
knfyyaavpsarnvpygniqsrlelrkklsckpfkwylenvypelrvpdhqdiafgalqq
gtncldtlghfadgvvgvyechnaggnqewaltkeksvkhmdlcltvvdrapgsliklqg
crendsrqkweqiegnsklrhvgsnlcldsrtaksgglsvevcgpalsqqwkftlnlq

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6egsB (B:)
kreaeakvrwpdfnqeayvggtmvrsgqdpyarnksnqvesdklrmdraipdtrhdqcqr
kqwrvdlpatsvvitfhnearsallrtvvsvlkkspphlikeiilvddysndpedgallg
kiekvrvlrndrreglmrsrvrgadaaqakvltfldshcecnehwlepllervaedrtrv
vspiidvinmdnfqyvgasadlkggfdwnlvfkwdymtpeqrrsrqgnpvapiktpmiag
glfvmdkfyfeelgkydmmmdvwggenleisfrvwqcggsleiipcsrvghvfrkqhpyt
fpggsgtvfarntrraaevwmdeyknfyyaavpsarnvpygniqsrlelrkklsckpfkw
ylenvypelrvpdhqdiafgalqqgtncldtlghfadgvvgvyechnaggnqewaltkek
svkhmdlcltvvdrapgsliklqgcrendsrqkweqiegnsklrhvgsnlcldsrtaksg
glsvevcgpalsqqwkftlnlqq

    Sequence, based on observed residues (ATOM records):
    >6egsB (B:)
akvrwpdfnqeayvgnqvesdklrmdraipdtrhdqcqrkqwrvdlpatsvvitfhnear
sallrtvvsvlkkspphlikeiilvddysndpedgallgkiekvrvlrndrreglmrsrv
rgadaaqakvltfldshcecnehwlepllervaedrtrvvspiidvinmdnfqyvgasad
lkggfdwnlvfkwdymtpeqrrsrqgnpvapiktpmiagglfvmdkfyfeelgkydmmmd
vwggenleisfrvwqcggsleiipcsrvghvfrvfarntrraaevwmdeyknfyyaavps
arnvpygniqsrlelrkklsckpfkwylenvypelrvpdhqdiafgalqqgtncldtlgh
fadgvvgvyechnaggnqewaltkeksvkhmdlcltvvdrapgsliklqgcrendsrqkw
eqiegnsklrhvgsnlcldsrtaksgglsvevcgpalsqqwkftlnl