PDB entry 6ef8

View 6ef8 on RCSB PDB site
Description: cryo-em of the omcs nanowires from geobacter sulfurreducens
Deposited on 2018-08-16, released 2019-04-10
The last revision was dated 2019-11-27, with a file datestamp of 2019-11-22.
Experiment type: EM
Resolution: 3.7 Å
R-factor: N/A
AEROSPACI score: 0.07 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: C-type cytochrome OmcS
    Species: Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) [TaxId:243231]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: C-type cytochrome OmcS
    Species: Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) [TaxId:243231]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: C-type cytochrome OmcS
    Species: Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) [TaxId:243231]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: C-type cytochrome OmcS
    Species: Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) [TaxId:243231]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: C-type cytochrome OmcS
    Species: Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) [TaxId:243231]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: C-type cytochrome OmcS
    Species: Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) [TaxId:243231]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: C-type cytochrome OmcS
    Species: Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) [TaxId:243231]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HEC

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6ef8A (A:)
fhsggvaecegchtmhnslggavmnsataqfttgpmllqgatqsssclnchqhagdtgps
syhistaeadmpagtaplqmtpggdfgwvkktytwnvrglntsegerkghnivagdynyv
adttlttapggtypanqlhcsschdphgkyrrfvdgsiattglpiknsgsyqnsndptaw
gavgayrilggtgyqpkslsgsyafanqvpaavapstynrteattqtrvaygqgmsewca
nchtdihnsayptnlrhpagngakfgatiaglynsykksgdltgtqasaylslapfeegt
adytvlkghakiddtaltgadatsnvnclschrahasgfdsmtrfnlayefttiadasgn
siygtdpntsslqgrsvnemtaayygrtadkfapyqralcnkchakd

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6ef8B (B:)
fhsggvaecegchtmhnslggavmnsataqfttgpmllqgatqsssclnchqhagdtgps
syhistaeadmpagtaplqmtpggdfgwvkktytwnvrglntsegerkghnivagdynyv
adttlttapggtypanqlhcsschdphgkyrrfvdgsiattglpiknsgsyqnsndptaw
gavgayrilggtgyqpkslsgsyafanqvpaavapstynrteattqtrvaygqgmsewca
nchtdihnsayptnlrhpagngakfgatiaglynsykksgdltgtqasaylslapfeegt
adytvlkghakiddtaltgadatsnvnclschrahasgfdsmtrfnlayefttiadasgn
siygtdpntsslqgrsvnemtaayygrtadkfapyqralcnkchakd

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >6ef8C (C:)
fhsggvaecegchtmhnslggavmnsataqfttgpmllqgatqsssclnchqhagdtgps
syhistaeadmpagtaplqmtpggdfgwvkktytwnvrglntsegerkghnivagdynyv
adttlttapggtypanqlhcsschdphgkyrrfvdgsiattglpiknsgsyqnsndptaw
gavgayrilggtgyqpkslsgsyafanqvpaavapstynrteattqtrvaygqgmsewca
nchtdihnsayptnlrhpagngakfgatiaglynsykksgdltgtqasaylslapfeegt
adytvlkghakiddtaltgadatsnvnclschrahasgfdsmtrfnlayefttiadasgn
siygtdpntsslqgrsvnemtaayygrtadkfapyqralcnkchakd

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6ef8D (D:)
fhsggvaecegchtmhnslggavmnsataqfttgpmllqgatqsssclnchqhagdtgps
syhistaeadmpagtaplqmtpggdfgwvkktytwnvrglntsegerkghnivagdynyv
adttlttapggtypanqlhcsschdphgkyrrfvdgsiattglpiknsgsyqnsndptaw
gavgayrilggtgyqpkslsgsyafanqvpaavapstynrteattqtrvaygqgmsewca
nchtdihnsayptnlrhpagngakfgatiaglynsykksgdltgtqasaylslapfeegt
adytvlkghakiddtaltgadatsnvnclschrahasgfdsmtrfnlayefttiadasgn
siygtdpntsslqgrsvnemtaayygrtadkfapyqralcnkchakd

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >6ef8E (E:)
fhsggvaecegchtmhnslggavmnsataqfttgpmllqgatqsssclnchqhagdtgps
syhistaeadmpagtaplqmtpggdfgwvkktytwnvrglntsegerkghnivagdynyv
adttlttapggtypanqlhcsschdphgkyrrfvdgsiattglpiknsgsyqnsndptaw
gavgayrilggtgyqpkslsgsyafanqvpaavapstynrteattqtrvaygqgmsewca
nchtdihnsayptnlrhpagngakfgatiaglynsykksgdltgtqasaylslapfeegt
adytvlkghakiddtaltgadatsnvnclschrahasgfdsmtrfnlayefttiadasgn
siygtdpntsslqgrsvnemtaayygrtadkfapyqralcnkchakd

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >6ef8F (F:)
fhsggvaecegchtmhnslggavmnsataqfttgpmllqgatqsssclnchqhagdtgps
syhistaeadmpagtaplqmtpggdfgwvkktytwnvrglntsegerkghnivagdynyv
adttlttapggtypanqlhcsschdphgkyrrfvdgsiattglpiknsgsyqnsndptaw
gavgayrilggtgyqpkslsgsyafanqvpaavapstynrteattqtrvaygqgmsewca
nchtdihnsayptnlrhpagngakfgatiaglynsykksgdltgtqasaylslapfeegt
adytvlkghakiddtaltgadatsnvnclschrahasgfdsmtrfnlayefttiadasgn
siygtdpntsslqgrsvnemtaayygrtadkfapyqralcnkchakd

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >6ef8G (G:)
fhsggvaecegchtmhnslggavmnsataqfttgpmllqgatqsssclnchqhagdtgps
syhistaeadmpagtaplqmtpggdfgwvkktytwnvrglntsegerkghnivagdynyv
adttlttapggtypanqlhcsschdphgkyrrfvdgsiattglpiknsgsyqnsndptaw
gavgayrilggtgyqpkslsgsyafanqvpaavapstynrteattqtrvaygqgmsewca
nchtdihnsayptnlrhpagngakfgatiaglynsykksgdltgtqasaylslapfeegt
adytvlkghakiddtaltgadatsnvnclschrahasgfdsmtrfnlayefttiadasgn
siygtdpntsslqgrsvnemtaayygrtadkfapyqralcnkchakd