PDB entry 6een

View 6een on RCSB PDB site
Description: crystal structure of a designer pentatrico peptide rna binding protein, bound to a complex rna target and featuring an infinite superhelix and microheterogeneity.
Deposited on 2018-08-15, released 2019-08-21
The last revision was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 2.01 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Designer Pentatricopeptide Protein dPPR10
    Species: Zea mays [TaxId:4577]
    Database cross-references and differences (RAF-indexed):
    • PDB 6EEN (0-314)
  • Chain 'B':
    Compound: Designer Pentatricopeptide Protein dPPR10
    Species: Zea mays [TaxId:4577]
    Database cross-references and differences (RAF-indexed):
    • PDB 6EEN (0-314)
  • Chain 'C':
    Compound: Designer Pentatricopeptide Protein dPPR10
    Species: Zea mays [TaxId:4577]
    Database cross-references and differences (RAF-indexed):
    • PDB 6EEN (0-314)
  • Chain 'D':
    Compound: Designer Pentatricopeptide Protein dPPR10
    Species: Zea mays [TaxId:4577]
    Database cross-references and differences (RAF-indexed):
    • PDB 6EEN (0-314)
  • Chain 'F':
    Compound: RNA (5'-r(p*gp*gp*gp*gp*gp*gp*gp*gp*g)-3')
    Species: Zea mays, synthetic [TaxId:4577]
  • Chain 'G':
    Compound: RNA (5'-r(p*up*up*up*up*up*up*up*up*u)-3')
    Species: Zea mays, synthetic [TaxId:4577]
  • Chain 'H':
    Compound: RNA (5'-r(p*ap*ap*ap*ap*ap*ap*ap*ap*a)-3')
    Species: Zea mays, synthetic [TaxId:4577]
  • Chain 'I':
    Compound: RNA (5'-r(p*cp*cp*cp*cp*cp*cp*cp*cp*c)-3')
    Species: Zea mays, synthetic [TaxId:4577]
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6eenA (A:)
vvtyttlidglakagrleealqlfqemkekgvkpdvvtyttlidglakagrleealqlfq
emkekgvkpdvvtyttlidglakagrleealqlfqemkekgvkpdvvtyttlidglakag
rleealqlfqemkekgvkpdvvtyttlidglakagrleealqlfeemkekgvkpdvvtyt
tlidglakagrleealqlfqemkekgvkpdvvtyttlidglakagrleealqlfeemkek
gvkpdvvtyttlidglakagrleealqlfeemkekgvkpdvvtyttlidglakagrleea
lqlfqemkekgvkpd

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6eenB (B:)
vvtyntlidglakagrleealqlfqemkekgvkpdvvtyntlidglakagrleealqlfq
emkekgvkpdvvtyntlidglakagrleealqlfqemkekgvkpdvvtyntlidglakag
rleealqlfqemkekgvkpdvvtyntlidglakagrleealqlfeemkekgvkpdvvtyn
tlidglakagrleealqlfqemkekgvkpdvvtyntlidglakagrleealqlfeemkek
gvkpdvvtyntlidglakagrleealqlfeemkekgvkpdvvtyntlidglakagrleea
lqlfqemkekgvkpd

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >6eenC (C:)
vvtyttlidglakagrleealqlfqemkekgvkpnvvtyttlidglakagrleealqlfq
emkekgvkpnvvtyttlidglakagrleealqlfqemkekgvkpnvvtyttlidglakag
rleealqlfqemkekgvkpnvvtyttlidglakagrleealqlfeemkekgvkpnvvtyt
tlidglakagrleealqlfqemkekgvkpnvvtyttlidglakagrleealqlfeemkek
gvkpnvvtyttlidglakagrleealqlfeemkekgvkpnvvtyttlidglakagrleea
lqlfqemkekgvkpn

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6eenD (D:)
vvtyntlidglakagrleealqlfqemkekgvkpsvvtyntlidglakagrleealqlfq
emkekgvkpsvvtyntlidglakagrleealqlfqemkekgvkpsvvtyntlidglakag
rleealqlfqemkekgvkpsvvtyntlidglakagrleealqlfeemkekgvkpsvvtyn
tlidglakagrleealqlfqemkekgvkpsvvtyntlidglakagrleealqlfeemkek
gvkpsvvtyntlidglakagrleealqlfeemkekgvkpsvvtyntlidglakagrleea
lqlfqemkekgvkps

  • Chain 'F':
    No sequence available.

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.

  • Chain 'I':
    No sequence available.