PDB entry 6edj

View 6edj on RCSB PDB site
Description: cryo-em structure of woodchuck hepatitis virus capsid
Deposited on 2018-08-09, released 2019-05-01
The last revision was dated 2019-12-18, with a file datestamp of 2019-12-13.
Experiment type: EM
Resolution: 4.52 Å
R-factor: N/A
AEROSPACI score: 0.05 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: External core antigen
    Species: Woodchuck hepatitis virus [TaxId:35269]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: External core antigen
    Species: Woodchuck hepatitis virus [TaxId:35269]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: External core antigen
    Species: Woodchuck hepatitis virus [TaxId:35269]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: External core antigen
    Species: Woodchuck hepatitis virus [TaxId:35269]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6edjA (A:)
mdidpykefgssyqllnflpldffpdlnalvdtatalyeeeltgrehcsphhtairqalv
cwdeltkliawmssnitseqvrtiivnhvndtwglkvrqslwfhlscltfgqhtvqeflv
sfgvwirtpapyrppnapilstlpehtvi

    Sequence, based on observed residues (ATOM records):
    >6edjA (A:)
mdidpykefgssyqllnflpldffpdlnalvdtatalyeeeltgrehcsphhtairqalv
cwdeltkliawmssnitseqvrtiivnhvndtwglkvrqslwfhlscltfgqhtvqeflv
sfgvwirtpapyrppnapils

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6edjB (B:)
mdidpykefgssyqllnflpldffpdlnalvdtatalyeeeltgrehcsphhtairqalv
cwdeltkliawmssnitseqvrtiivnhvndtwglkvrqslwfhlscltfgqhtvqeflv
sfgvwirtpapyrppnapilstlpehtvi

    Sequence, based on observed residues (ATOM records):
    >6edjB (B:)
mdidpykefgssyqllnflpldffpdlnalvdtatalyeeeltgrehcsphhtairqalv
cwdeltkliawmssnitseqvrtiivnhvndtwglkvrqslwfhlscltfgqhtvqeflv
sfgvwirtpapyrppnapil

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6edjC (C:)
mdidpykefgssyqllnflpldffpdlnalvdtatalyeeeltgrehcsphhtairqalv
cwdeltkliawmssnitseqvrtiivnhvndtwglkvrqslwfhlscltfgqhtvqeflv
sfgvwirtpapyrppnapilstlpehtvi

    Sequence, based on observed residues (ATOM records):
    >6edjC (C:)
mdidpykefgssyqllnflpldffpdlnalvdtatalyeeeltgrehcsphhtairqalv
cwdeltkliawmssnitseqvrtiivnhvndtwglkvrqslwfhlscltfgqhtvqeflv
sfgvwirtpapyrppnapils

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6edjD (D:)
mdidpykefgssyqllnflpldffpdlnalvdtatalyeeeltgrehcsphhtairqalv
cwdeltkliawmssnitseqvrtiivnhvndtwglkvrqslwfhlscltfgqhtvqeflv
sfgvwirtpapyrppnapilstlpehtvi

    Sequence, based on observed residues (ATOM records):
    >6edjD (D:)
mdidpykefgssyqllnflpldffpdlnalvdtatalyeeeltgrehcsphhtairqalv
cwdeltkliawmssnitseqvrtiivnhvndtwglkvrqslwfhlscltfgqhtvqeflv
sfgvwirtpapyrppnapil