PDB entry 6ebo

View 6ebo on RCSB PDB site
Description: Crystal Structure of the Class Ie Ribonucleotide Reductase Beta Subunit from Aerococcus urinae in Unactivated Form
Class: oxidoreductase
Keywords: ribonucleotide reductase, beta subunit, RNR, R2, class Ie, metal-free, OXIDOREDUCTASE
Deposited on 2018-08-06, released 2018-09-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 1.58 Å
R-factor: N/A
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ribonucleoside-diphosphate reductase, beta subunit
    Species: Aerococcus urinae (strain ACS-120-V-Col10a) [TaxId:866775]
    Gene: HMPREF9243_0731
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6eboa_
  • Chain 'B':
    Compound: Ribonucleoside-diphosphate reductase, beta subunit
    Species: Aerococcus urinae (strain ACS-120-V-Col10a) [TaxId:866775]
    Gene: HMPREF9243_0731
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ebob_
  • Chain 'C':
    Compound: Ribonucleoside-diphosphate reductase, beta subunit
    Species: Aerococcus urinae (strain ACS-120-V-Col10a) [TaxId:866775]
    Gene: HMPREF9243_0731
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6eboc_
  • Chain 'D':
    Compound: Ribonucleoside-diphosphate reductase, beta subunit
    Species: Aerococcus urinae (strain ACS-120-V-Col10a) [TaxId:866775]
    Gene: HMPREF9243_0731
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ebod_
  • Heterogens: CA, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6eboA (A:)
mgsshhhhhhssglvprgstknyydrsvspveyayfdqsqnmrainwnkivdekdlevwn
rvtqnfwlpenipvsndlpswneldddwqqlitrtftgltlldtvqssigdvaqiknslt
eqeqviyanfafmvgvharsygtifstlctseqieeahewvvdnealqarpkalipfyta
ddplkskiaaalmpgfllyggfylpfylsargklpntsdiirlilrdkvihnfysgykyq
lkvaklspekqaemkqfvfdlldkmiglektylhqlydgfgladeairfslynagkflqn
lgyespftkeetriapevfaqlsaradenhdffsgsgssyiigtseetldedwdf

    Sequence, based on observed residues (ATOM records): (download) 
    >6eboA (A:)
nyydrsvspveyayfdqsqnmrainwnkivdekdlevwnrvtqnfwlpenipvsndlpsw
neldddwqqlitrtftgltlldtvqssigdvaqiknslteqeqviyanfafmvgvharsy
gtifstlctseqieeahewvvdnealqarpkalipfytaddplkskiaaalmpgfllygg
fylpfylsargklpntsdiirlilrdkvihnfysgykyqlkvaklspekqaemkqfvfdl
ldkmiglektylhqlydgfgladeairfslynagkflqnlgyespftkeetriapevfaq
lsaradenhdf

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6eboB (B:)
mgsshhhhhhssglvprgstknyydrsvspveyayfdqsqnmrainwnkivdekdlevwn
rvtqnfwlpenipvsndlpswneldddwqqlitrtftgltlldtvqssigdvaqiknslt
eqeqviyanfafmvgvharsygtifstlctseqieeahewvvdnealqarpkalipfyta
ddplkskiaaalmpgfllyggfylpfylsargklpntsdiirlilrdkvihnfysgykyq
lkvaklspekqaemkqfvfdlldkmiglektylhqlydgfgladeairfslynagkflqn
lgyespftkeetriapevfaqlsaradenhdffsgsgssyiigtseetldedwdf

    Sequence, based on observed residues (ATOM records): (download) 
    >6eboB (B:)
nyydrsvspveyayfdqsqnmrainwnkivdekdlevwnrvtqnfwlpenipvsndlpsw
neldddwqqlitrtftgltlldtvqssigdvaqiknslteqeqviyanfafmvgvharsy
gtifstlctseqieeahewvvdnealqarpkalipfytaddplkskiaaalmpgfllygg
fylpfylsargklpntsdiirlilrdkvihnfysgykyqlkvaklspekqaemkqfvfdl
ldkmiglektylhqlydgfgladeairfslynagkflqnlgyespftkeetriapevfaq
lsa

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6eboC (C:)
mgsshhhhhhssglvprgstknyydrsvspveyayfdqsqnmrainwnkivdekdlevwn
rvtqnfwlpenipvsndlpswneldddwqqlitrtftgltlldtvqssigdvaqiknslt
eqeqviyanfafmvgvharsygtifstlctseqieeahewvvdnealqarpkalipfyta
ddplkskiaaalmpgfllyggfylpfylsargklpntsdiirlilrdkvihnfysgykyq
lkvaklspekqaemkqfvfdlldkmiglektylhqlydgfgladeairfslynagkflqn
lgyespftkeetriapevfaqlsaradenhdffsgsgssyiigtseetldedwdf

    Sequence, based on observed residues (ATOM records): (download) 
    >6eboC (C:)
nyydrsvspveyayfdqsqnmrainwnkivdekdlevwnrvtqnfwlpenipvsndlpsw
neldddwqqlitrtftgltlldtvqssigdvaqiknslteqeqviyanfafmvgvharsy
gtifstlctseqieeahewvvdnealqarpkalipfytaddplkskiaaalmpgfllygg
fylpfylsargklpntsdiirlilrdkvihnfysgykyqlkvaklspekqaemkqfvfdl
ldkmiglektylhqlydgfgladeairfslynagkflqnlgyespftkeetriapevfaq
lsara

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6eboD (D:)
mgsshhhhhhssglvprgstknyydrsvspveyayfdqsqnmrainwnkivdekdlevwn
rvtqnfwlpenipvsndlpswneldddwqqlitrtftgltlldtvqssigdvaqiknslt
eqeqviyanfafmvgvharsygtifstlctseqieeahewvvdnealqarpkalipfyta
ddplkskiaaalmpgfllyggfylpfylsargklpntsdiirlilrdkvihnfysgykyq
lkvaklspekqaemkqfvfdlldkmiglektylhqlydgfgladeairfslynagkflqn
lgyespftkeetriapevfaqlsaradenhdffsgsgssyiigtseetldedwdf

    Sequence, based on observed residues (ATOM records): (download) 
    >6eboD (D:)
nyydrsvspveyayfdqsqnmrainwnkivdekdlevwnrvtqnfwlpenipvsndlpsw
neldddwqqlitrtftgltlldtvqssigdvaqiknslteqeqviyanfafmvgvharsy
gtifstlctseqieeahewvvdnealqarpkalipfytaddplkskiaaalmpgfllygg
fylpfylsargklpntsdiirlilrdkvihnfysgykyqlkvaklspekqaemkqfvfdl
ldkmiglektylhqlydgfgladeairfslynagkflqnlgyespftkeetriapevfaq
lsaradenhdf