PDB entry 6dxd

View 6dxd on RCSB PDB site
Description: Crystal structure of chalcone synthase from Arabidopsis thaliana - C347S mutant
Class: transferase
Keywords: Thiolase, Flavonoid, Polyketide synthase, TRANSFERASE
Deposited on 2018-06-28, released 2018-10-17
The last revision prior to the SCOPe 2.07 freeze date was dated 2018-10-17, with a file datestamp of 2018-10-12.
Experiment type: XRAY
Resolution: 1.59 Å
R-factor: N/A
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: chalcone synthase
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: CHS, TT4, At5g13930, MAC12.11, MAC12.14
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13114 (Start-394)
      • engineered mutation (346)
    Domains in SCOPe 2.07: d6dxda1, d6dxda2
  • Chain 'B':
    Compound: chalcone synthase
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: CHS, TT4, At5g13930, MAC12.11, MAC12.14
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13114 (Start-394)
      • engineered mutation (346)
    Domains in SCOPe 2.07: d6dxdb1, d6dxdb2
  • Chain 'C':
    Compound: chalcone synthase
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: CHS, TT4, At5g13930, MAC12.11, MAC12.14
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13114 (Start-394)
      • engineered mutation (346)
    Domains in SCOPe 2.07: d6dxdc1, d6dxdc2
  • Chain 'D':
    Compound: chalcone synthase
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: CHS, TT4, At5g13930, MAC12.11, MAC12.14
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13114 (Start-394)
      • engineered mutation (346)
    Domains in SCOPe 2.07: d6dxdd1, d6dxdd2
  • Heterogens: CSD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6dxdA (A:)
mvmagassldeirqaqradgpagilaigtanpenhvlqaeypdyyfritnsehmtdlkek
fkrmcdkstirkrhmhlteeflkenphmcaymapsldtrqdivvvevpklgkeaavkaik
ewgqpkskithvvfcttsgvdmpgadyqltkllglrpsvkrlmmyqqgcfaggtvlriak
dlaennrgarvlvvcseitavtfrgpsdthldslvgqalfsdgaaalivgsdpdtsvgek
pifemvsaaqtilpdsdgaidghlrevgltfhllkdvpglisknivksldeafkplgisd
wnslfwiahpggpaildqveiklglkeekmratrhvlseygnmssasvlfildemrrksa
kdgvattgeglewgvlfgfgpgltvetvvlhsvpl

    Sequence, based on observed residues (ATOM records): (download) 
    >6dxdA (A:)
ssldeirqaqradgpagilaigtanpenhvlqaeypdyyfritnsehmtdlkekfkrmcd
kstirkrhmhlteeflkenphmcaymapsldtrqdivvvevpklgkeaavkaikewgqpk
skithvvfcttsgvdmpgadyqltkllglrpsvkrlmmyqqgcfaggtvlriakdlaenn
rgarvlvvcseitavtfrgpsdthldslvgqalfsdgaaalivgsdpdtsvgekpifemv
saaqtilpdsdgaidghlrevgltfhllkdvpglisknivksldeafkplgisdwnslfw
iahpggpaildqveiklglkeekmratrhvlseygnmssasvlfildemrrksakdgvat
tgeglewgvlfgfgpgltvetvvlhsvpl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6dxdB (B:)
mvmagassldeirqaqradgpagilaigtanpenhvlqaeypdyyfritnsehmtdlkek
fkrmcdkstirkrhmhlteeflkenphmcaymapsldtrqdivvvevpklgkeaavkaik
ewgqpkskithvvfcttsgvdmpgadyqltkllglrpsvkrlmmyqqgcfaggtvlriak
dlaennrgarvlvvcseitavtfrgpsdthldslvgqalfsdgaaalivgsdpdtsvgek
pifemvsaaqtilpdsdgaidghlrevgltfhllkdvpglisknivksldeafkplgisd
wnslfwiahpggpaildqveiklglkeekmratrhvlseygnmssasvlfildemrrksa
kdgvattgeglewgvlfgfgpgltvetvvlhsvpl

    Sequence, based on observed residues (ATOM records): (download) 
    >6dxdB (B:)
ssldeirqaqradgpagilaigtanpenhvlqaeypdyyfritnsehmtdlkekfkrmcd
kstirkrhmhlteeflkenphmcaymapsldtrqdivvvevpklgkeaavkaikewgqpk
skithvvfcttsgvdmpgadyqltkllglrpsvkrlmmyqqgcfaggtvlriakdlaenn
rgarvlvvcseitavtfrgpsdthldslvgqalfsdgaaalivgsdpdtsvgekpifemv
saaqtilpdsdgaidghlrevgltfhllkdvpglisknivksldeafkplgisdwnslfw
iahpggpaildqveiklglkeekmratrhvlseygnmssasvlfildemrrksakdgvat
tgeglewgvlfgfgpgltvetvvlhsvpl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6dxdC (C:)
mvmagassldeirqaqradgpagilaigtanpenhvlqaeypdyyfritnsehmtdlkek
fkrmcdkstirkrhmhlteeflkenphmcaymapsldtrqdivvvevpklgkeaavkaik
ewgqpkskithvvfcttsgvdmpgadyqltkllglrpsvkrlmmyqqgcfaggtvlriak
dlaennrgarvlvvcseitavtfrgpsdthldslvgqalfsdgaaalivgsdpdtsvgek
pifemvsaaqtilpdsdgaidghlrevgltfhllkdvpglisknivksldeafkplgisd
wnslfwiahpggpaildqveiklglkeekmratrhvlseygnmssasvlfildemrrksa
kdgvattgeglewgvlfgfgpgltvetvvlhsvpl

    Sequence, based on observed residues (ATOM records): (download) 
    >6dxdC (C:)
ssldeirqaqradgpagilaigtanpenhvlqaeypdyyfritnsehmtdlkekfkrmcd
kstirkrhmhlteeflkenphmcaymapsldtrqdivvvevpklgkeaavkaikewgqpk
skithvvfcttsgvdmpgadyqltkllglrpsvkrlmmyqqgcfaggtvlriakdlaenn
rgarvlvvcseitavtfrgpsdthldslvgqalfsdgaaalivgsdpdtsvgekpifemv
saaqtilpdsdgaidghlrevgltfhllkdvpglisknivksldeafkplgisdwnslfw
iahpggpaildqveiklglkeekmratrhvlseygnmssasvlfildemrrksakdgvat
tgeglewgvlfgfgpgltvetvvlhsvpl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6dxdD (D:)
mvmagassldeirqaqradgpagilaigtanpenhvlqaeypdyyfritnsehmtdlkek
fkrmcdkstirkrhmhlteeflkenphmcaymapsldtrqdivvvevpklgkeaavkaik
ewgqpkskithvvfcttsgvdmpgadyqltkllglrpsvkrlmmyqqgcfaggtvlriak
dlaennrgarvlvvcseitavtfrgpsdthldslvgqalfsdgaaalivgsdpdtsvgek
pifemvsaaqtilpdsdgaidghlrevgltfhllkdvpglisknivksldeafkplgisd
wnslfwiahpggpaildqveiklglkeekmratrhvlseygnmssasvlfildemrrksa
kdgvattgeglewgvlfgfgpgltvetvvlhsvpl

    Sequence, based on observed residues (ATOM records): (download) 
    >6dxdD (D:)
ssldeirqaqradgpagilaigtanpenhvlqaeypdyyfritnsehmtdlkekfkrmcd
kstirkrhmhlteeflkenphmcaymapsldtrqdivvvevpklgkeaavkaikewgqpk
skithvvfcttsgvdmpgadyqltkllglrpsvkrlmmyqqgcfaggtvlriakdlaenn
rgarvlvvcseitavtfrgpsdthldslvgqalfsdgaaalivgsdpdtsvgekpifemv
saaqtilpdsdgaidghlrevgltfhllkdvpglisknivksldeafkplgisdwnslfw
iahpggpaildqveiklglkeekmratrhvlseygnmssasvlfildemrrksakdgvat
tgeglewgvlfgfgpgltvetvvlhsvpl