PDB entry 6dnq

View 6dnq on RCSB PDB site
Description: HBZ77 in complex with KIX and c-Myb
Class: transcription
Keywords: transcription coactivator, transcription factor, viral, eukaryotic, complex, TRANSCRIPTION
Deposited on 2018-06-07, released 2018-09-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-12-18, with a file datestamp of 2019-12-13.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: Transcriptional activator Myb
  Species: Mus musculus [TaxId:10090]
  Gene: Myb
  Database cross-references and differences (RAF-indexed):
  • Uniprot P06876
• Chain 'B':
  Compound: creb-binding protein
  Species: Mus musculus [TaxId:10090]
  Gene: CREBBP, CBP
  Database cross-references and differences (RAF-indexed):
  • Uniprot P45481 (1-87)
  Domains in SCOPe 2.08: d6dnqb_
• Chain 'C':
  Compound: Transcriptional activator Myb
  Species: Mus musculus [TaxId:10090]
  Gene: Myb
  Database cross-references and differences (RAF-indexed):
  • Uniprot P06876
• Chain 'D':
  Compound: creb-binding protein
  Species: Mus musculus [TaxId:10090]
  Gene: CREBBP, CBP
  Database cross-references and differences (RAF-indexed):
  • Uniprot P45481 (1-87)
  Domains in SCOPe 2.08: d6dnqd_
• Chain 'E':
  Compound: BZIP factor
  Species: Human T-lymphotropic virus 1 [TaxId:11908]
  Gene: HBZ
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q2Q067 (4-End)
    • conflict (10)
    • conflict (15)
• Heterogens: EDO, HOH

PDB Chain Sequences:

• Chain 'A':
  No sequence available.
  
  
• Chain 'B':
  Sequence, based on SEQRES records: (download)
  

  >6dnqB (B:)
  mgvrkgwhehvtqdlrshlvhklvqaifptpdpaalkdrrmenlvayakkvegdmyesan
  srdeyyhllaekiykiqkeleekrrsrl
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >6dnqB (B:)
  gvrkgwhehvtqdlrshlvhklvqaifptpdpaalkdrrmenlvayakkvegdmyesans
  rdeyyhllaekiykiqkeleekrrsrl
  

  
  
• Chain 'C':
  No sequence available.
  
  
• Chain 'D':
  Sequence, based on SEQRES records: (download)
  

  >6dnqD (D:)
  mgvrkgwhehvtqdlrshlvhklvqaifptpdpaalkdrrmenlvayakkvegdmyesan
  srdeyyhllaekiykiqkeleekrrsrl
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >6dnqD (D:)
  gvrkgwhehvtqdlrshlvhklvqaifptpdpaalkdrrmenlvayakkvegdmyesans
  rdeyyhllaekiykiqkeleekrrsrl
  

  
  
• Chain 'E':
  No sequence available.