PDB entry 6dhm

View 6dhm on RCSB PDB site
Description: bovine glutamate dehydrogenase complexed with zinc
Deposited on 2018-05-20, released 2018-07-25
The last revision was dated 2018-07-25, with a file datestamp of 2018-07-20.
No data on structure quality are available

Chains and heterogens:

  • Chain 'A':
    Compound: Glutamate dehydrogenase 1, mitochondrial
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Glutamate dehydrogenase 1, mitochondrial
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Glutamate dehydrogenase 1, mitochondrial
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Glutamate dehydrogenase 1, mitochondrial
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Glutamate dehydrogenase 1, mitochondrial
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Glutamate dehydrogenase 1, mitochondrial
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: GLU, NDP, GTP, ZN

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.02, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6dhmA (A:)
lppsvsgpvrapllrglrpaamyrclgealllsrigpaalgsvaadsavllgrargqaaa
avaapqpglvpparrhyseaaadreddpnffkmvegffdrgasivedklvedlktretee
qkrnrvrgilriikpcnhvlslsfpirrddgsweviegyraqhsqhrtpckggirystdv
svdevkalaslmtykcavvdvpfggakagvkinpknytdnelekitrrftmelakkgfig
pgvdvpapdmstgeremswiadtyastighydinahacvtgkpisqggihgrisatgrgv
fhgienfineasymsilgmtpgfgdktfavqgfgnvglhsmrylhrfgakcvavgesdgs
iwnpdgidpkeledfklqhgtilgfpkakiyegsilevdcdilipaasekqltksnaprv
kakiiaegangpttpeadkiflernimvipdlylnaggvtvsyfewlknlnhvsygrltf
kyerdsnyhllmsvqeslerkfgkhggtipivptaefqdrisgasekdivhsglaytmer
sarqimrtamkynlgldlrtaayvnaiekvfrvyneagvtft

    Sequence, based on observed residues (ATOM records):
    >6dhmA (A:)
adreddpnffkmvegffdrgasivedklvedlktreteeqkrnrvrgilriikpcnhvls
lsfpirrddgsweviegyraqhsqhrtpckggirystdvsvdevkalaslmtykcavvdv
pfggakagvkinpknytdnelekitrrftmelakkgfigpgvdvpapdmstgeremswia
dtyastighydinahacvtgkpisqggihgrisatgrgvfhgienfineasymsilgmtp
gfgdktfavqgfgnvglhsmrylhrfgakcvavgesdgsiwnpdgidpkeledfklqhgt
ilgfpkakiyegsilevdcdilipaasekqltksnaprvkakiiaegangpttpeadkif
lernimvipdlylnaggvtvsyfewlknlnhvsygrltfkyerdsnyhllmsvqeslerk
fgkhggtipivptaefqdrisgasekdivhsglaytmersarqimrtamkynlgldlrta
ayvnaiekvfrvyne

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6dhmB (B:)
lppsvsgpvrapllrglrpaamyrclgealllsrigpaalgsvaadsavllgrargqaaa
avaapqpglvpparrhyseaaadreddpnffkmvegffdrgasivedklvedlktretee
qkrnrvrgilriikpcnhvlslsfpirrddgsweviegyraqhsqhrtpckggirystdv
svdevkalaslmtykcavvdvpfggakagvkinpknytdnelekitrrftmelakkgfig
pgvdvpapdmstgeremswiadtyastighydinahacvtgkpisqggihgrisatgrgv
fhgienfineasymsilgmtpgfgdktfavqgfgnvglhsmrylhrfgakcvavgesdgs
iwnpdgidpkeledfklqhgtilgfpkakiyegsilevdcdilipaasekqltksnaprv
kakiiaegangpttpeadkiflernimvipdlylnaggvtvsyfewlknlnhvsygrltf
kyerdsnyhllmsvqeslerkfgkhggtipivptaefqdrisgasekdivhsglaytmer
sarqimrtamkynlgldlrtaayvnaiekvfrvyneagvtft

    Sequence, based on observed residues (ATOM records):
    >6dhmB (B:)
adreddpnffkmvegffdrgasivedklvedlktreteeqkrnrvrgilriikpcnhvls
lsfpirrddgsweviegyraqhsqhrtpckggirystdvsvdevkalaslmtykcavvdv
pfggakagvkinpknytdnelekitrrftmelakkgfigpgvdvpapdmstgeremswia
dtyastighydinahacvtgkpisqggihgrisatgrgvfhgienfineasymsilgmtp
gfgdktfavqgfgnvglhsmrylhrfgakcvavgesdgsiwnpdgidpkeledfklqhgt
ilgfpkakiyegsilevdcdilipaasekqltksnaprvkakiiaegangpttpeadkif
lernimvipdlylnaggvtvsyfewlknlnhvsygrltfkyerdsnyhllmsvqeslerk
fgkhggtipivptaefqdrisgasekdivhsglaytmersarqimrtamkynlgldlrta
ayvnaiekvfrvyne

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6dhmC (C:)
lppsvsgpvrapllrglrpaamyrclgealllsrigpaalgsvaadsavllgrargqaaa
avaapqpglvpparrhyseaaadreddpnffkmvegffdrgasivedklvedlktretee
qkrnrvrgilriikpcnhvlslsfpirrddgsweviegyraqhsqhrtpckggirystdv
svdevkalaslmtykcavvdvpfggakagvkinpknytdnelekitrrftmelakkgfig
pgvdvpapdmstgeremswiadtyastighydinahacvtgkpisqggihgrisatgrgv
fhgienfineasymsilgmtpgfgdktfavqgfgnvglhsmrylhrfgakcvavgesdgs
iwnpdgidpkeledfklqhgtilgfpkakiyegsilevdcdilipaasekqltksnaprv
kakiiaegangpttpeadkiflernimvipdlylnaggvtvsyfewlknlnhvsygrltf
kyerdsnyhllmsvqeslerkfgkhggtipivptaefqdrisgasekdivhsglaytmer
sarqimrtamkynlgldlrtaayvnaiekvfrvyneagvtft

    Sequence, based on observed residues (ATOM records):
    >6dhmC (C:)
adreddpnffkmvegffdrgasivedklvedlktreteeqkrnrvrgilriikpcnhvls
lsfpirrddgsweviegyraqhsqhrtpckggirystdvsvdevkalaslmtykcavvdv
pfggakagvkinpknytdnelekitrrftmelakkgfigpgvdvpapdmstgeremswia
dtyastighydinahacvtgkpisqggihgrisatgrgvfhgienfineasymsilgmtp
gfgdktfavqgfgnvglhsmrylhrfgakcvavgesdgsiwnpdgidpkeledfklqhgt
ilgfpkakiyegsilevdcdilipaasekqltksnaprvkakiiaegangpttpeadkif
lernimvipdlylnaggvtvsyfewlknlnhvsygrltfkyerdsnyhllmsvqeslerk
fgkhggtipivptaefqdrisgasekdivhsglaytmersarqimrtamkynlgldlrta
ayvnaiekvfrvyne

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6dhmD (D:)
lppsvsgpvrapllrglrpaamyrclgealllsrigpaalgsvaadsavllgrargqaaa
avaapqpglvpparrhyseaaadreddpnffkmvegffdrgasivedklvedlktretee
qkrnrvrgilriikpcnhvlslsfpirrddgsweviegyraqhsqhrtpckggirystdv
svdevkalaslmtykcavvdvpfggakagvkinpknytdnelekitrrftmelakkgfig
pgvdvpapdmstgeremswiadtyastighydinahacvtgkpisqggihgrisatgrgv
fhgienfineasymsilgmtpgfgdktfavqgfgnvglhsmrylhrfgakcvavgesdgs
iwnpdgidpkeledfklqhgtilgfpkakiyegsilevdcdilipaasekqltksnaprv
kakiiaegangpttpeadkiflernimvipdlylnaggvtvsyfewlknlnhvsygrltf
kyerdsnyhllmsvqeslerkfgkhggtipivptaefqdrisgasekdivhsglaytmer
sarqimrtamkynlgldlrtaayvnaiekvfrvyneagvtft

    Sequence, based on observed residues (ATOM records):
    >6dhmD (D:)
adreddpnffkmvegffdrgasivedklvedlktreteeqkrnrvrgilriikpcnhvls
lsfpirrddgsweviegyraqhsqhrtpckggirystdvsvdevkalaslmtykcavvdv
pfggakagvkinpknytdnelekitrrftmelakkgfigpgvdvpapdmstgeremswia
dtyastighydinahacvtgkpisqggihgrisatgrgvfhgienfineasymsilgmtp
gfgdktfavqgfgnvglhsmrylhrfgakcvavgesdgsiwnpdgidpkeledfklqhgt
ilgfpkakiyegsilevdcdilipaasekqltksnaprvkakiiaegangpttpeadkif
lernimvipdlylnaggvtvsyfewlknlnhvsygrltfkyerdsnyhllmsvqeslerk
fgkhggtipivptaefqdrisgasekdivhsglaytmersarqimrtamkynlgldlrta
ayvnaiekvfrvyne

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6dhmE (E:)
lppsvsgpvrapllrglrpaamyrclgealllsrigpaalgsvaadsavllgrargqaaa
avaapqpglvpparrhyseaaadreddpnffkmvegffdrgasivedklvedlktretee
qkrnrvrgilriikpcnhvlslsfpirrddgsweviegyraqhsqhrtpckggirystdv
svdevkalaslmtykcavvdvpfggakagvkinpknytdnelekitrrftmelakkgfig
pgvdvpapdmstgeremswiadtyastighydinahacvtgkpisqggihgrisatgrgv
fhgienfineasymsilgmtpgfgdktfavqgfgnvglhsmrylhrfgakcvavgesdgs
iwnpdgidpkeledfklqhgtilgfpkakiyegsilevdcdilipaasekqltksnaprv
kakiiaegangpttpeadkiflernimvipdlylnaggvtvsyfewlknlnhvsygrltf
kyerdsnyhllmsvqeslerkfgkhggtipivptaefqdrisgasekdivhsglaytmer
sarqimrtamkynlgldlrtaayvnaiekvfrvyneagvtft

    Sequence, based on observed residues (ATOM records):
    >6dhmE (E:)
adreddpnffkmvegffdrgasivedklvedlktreteeqkrnrvrgilriikpcnhvls
lsfpirrddgsweviegyraqhsqhrtpckggirystdvsvdevkalaslmtykcavvdv
pfggakagvkinpknytdnelekitrrftmelakkgfigpgvdvpapdmstgeremswia
dtyastighydinahacvtgkpisqggihgrisatgrgvfhgienfineasymsilgmtp
gfgdktfavqgfgnvglhsmrylhrfgakcvavgesdgsiwnpdgidpkeledfklqhgt
ilgfpkakiyegsilevdcdilipaasekqltksnaprvkakiiaegangpttpeadkif
lernimvipdlylnaggvtvsyfewlknlnhvsygrltfkyerdsnyhllmsvqeslerk
fgkhggtipivptaefqdrisgasekdivhsglaytmersarqimrtamkynlgldlrta
ayvnaiekvfrvyne

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6dhmF (F:)
lppsvsgpvrapllrglrpaamyrclgealllsrigpaalgsvaadsavllgrargqaaa
avaapqpglvpparrhyseaaadreddpnffkmvegffdrgasivedklvedlktretee
qkrnrvrgilriikpcnhvlslsfpirrddgsweviegyraqhsqhrtpckggirystdv
svdevkalaslmtykcavvdvpfggakagvkinpknytdnelekitrrftmelakkgfig
pgvdvpapdmstgeremswiadtyastighydinahacvtgkpisqggihgrisatgrgv
fhgienfineasymsilgmtpgfgdktfavqgfgnvglhsmrylhrfgakcvavgesdgs
iwnpdgidpkeledfklqhgtilgfpkakiyegsilevdcdilipaasekqltksnaprv
kakiiaegangpttpeadkiflernimvipdlylnaggvtvsyfewlknlnhvsygrltf
kyerdsnyhllmsvqeslerkfgkhggtipivptaefqdrisgasekdivhsglaytmer
sarqimrtamkynlgldlrtaayvnaiekvfrvyneagvtft

    Sequence, based on observed residues (ATOM records):
    >6dhmF (F:)
adreddpnffkmvegffdrgasivedklvedlktreteeqkrnrvrgilriikpcnhvls
lsfpirrddgsweviegyraqhsqhrtpckggirystdvsvdevkalaslmtykcavvdv
pfggakagvkinpknytdnelekitrrftmelakkgfigpgvdvpapdmstgeremswia
dtyastighydinahacvtgkpisqggihgrisatgrgvfhgienfineasymsilgmtp
gfgdktfavqgfgnvglhsmrylhrfgakcvavgesdgsiwnpdgidpkeledfklqhgt
ilgfpkakiyegsilevdcdilipaasekqltksnaprvkakiiaegangpttpeadkif
lernimvipdlylnaggvtvsyfewlknlnhvsygrltfkyerdsnyhllmsvqeslerk
fgkhggtipivptaefqdrisgasekdivhsglaytmersarqimrtamkynlgldlrta
ayvnaiekvfrvyneagvtft