PDB entry 6dfm
View 6dfm on RCSB PDB site
Description: Crystal structure of human GRP78 in complex with 8-aminoadenosine
Class: chaperone
Keywords: Endoplasmic reticulum, Unfolded protein response, Nucleoside analog, CHAPERONE
Deposited on
2018-05-15, released
2019-05-15
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-05-15, with a file datestamp of
2019-05-10.
Experiment type: XRAY
Resolution: 2.14 Å
R-factor: N/A
AEROSPACI score: 0.28
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Endoplasmic reticulum chaperone BiP
Species: Homo sapiens [TaxId:9606]
Gene: HSPA5, GRP78
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6dfma1, d6dfma2 - Chain 'B':
Compound: Endoplasmic reticulum chaperone BiP
Species: Homo sapiens [TaxId:9606]
Gene: HSPA5, GRP78
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6dfmb1, d6dfmb2 - Heterogens: 3BH, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>6dfmA (A:)
dvgtvvgidlgttyscvgvfkngrveiiandqgnritpsyvaftpegerligdaaknqlt
snpentvfdakrligrtwndpsvqqdikflpfkvvekktkpyiqvdigggqtktfapeei
samvltkmketaeaylgkkvthavvtvpayfndaqrqatkdagtiaglnvmriineptaa
aiaygldkregeknilvfdlgggtfdvslltidngvfevvatngdthlggedfdqrvmeh
fiklykkktgkdvrkdnravqklrrevekakralssqhqarieiesfyegedfsetltra
kfeelnmdlfrstmkpvqkvledsdlkksdideivlvggstripkiqqlvkeffngkeps
rginpdeavaygaavqagvlsg
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>6dfmB (B:)
dvgtvvgidlgttyscvgvfkngrveiiandqgnritpsyvaftpegerligdaaknqlt
snpentvfdakrligrtwndpsvqqdikflpfkvvekktkpyiqvdigggqtktfapeei
samvltkmketaeaylgkkvthavvtvpayfndaqrqatkdagtiaglnvmriineptaa
aiaygldkregeknilvfdlgggtfdvslltidngvfevvatngdthlggedfdqrvmeh
fiklykkktgkdvrkdnravqklrrevekakralssqhqarieiesfyegedfsetltra
kfeelnmdlfrstmkpvqkvledsdlkksdideivlvggstripkiqqlvkeffngkeps
rginpdeavaygaavqagvlsg