PDB entry 6dfi
View 6dfi on RCSB PDB site
Description: Crystal structure of anti-Zika antibody Z021 bound to Zika virus envelope protein DIII
Class: immune system
Keywords: antibody, Fab, Zika, Dengue, recurrent, neutralizing, immune system
Deposited on
2018-05-14, released
2018-10-24
The last revision prior to the SCOPe 2.07 freeze date was dated
2018-10-24, with a file datestamp of
2018-10-19.
Experiment type: XRAY
Resolution: 2.48 Å
R-factor: N/A
AEROSPACI score: 0.21
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'E':
Compound: Zika virus envelope protein DIII
Species: Zika virus [TaxId:64320]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d6dfie_ - Chain 'H':
Compound: anti-Zika antibody Z021, Heavy Chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: anti-Zika antibody Z021, Light Chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d6dfil1, d6dfil2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'E':
Sequence, based on SEQRES records: (download)
>6dfiE (E:)
mrlkgvsyslctaaftftkipaetlhgtvtvevqyagtdgpckvpaqmavdmqtltpvgr
litanpvitestenskmmleldppfgdsyivigvgekkithhwhrsgsti
Sequence, based on observed residues (ATOM records): (download)
>6dfiE (E:)
vsyslctaaftftkipaetlhgtvtvevqyagtdgpckvpaqmavdmqtltpvgrlitan
pvitestenskmmleldppfgdsyivigvgekkithhwhrsg
- Chain 'H':
No sequence available.
- Chain 'L':
Sequence, based on SEQRES records: (download)
>6dfiL (L:)
eivltqspatlslspgqratlscrasqsvsnyfawyqqkpgqaprlliydtskratgtpa
rfsgsgsgtdftltisslepedfavyycqernnwpltwtfglgtkveikrtvaapsvfif
ppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsst
ltlskadyekhkvyacevthqglsspvtksfnrgec
Sequence, based on observed residues (ATOM records): (download)
>6dfiL (L:)
eivltqspatlslspgqratlscrasqsvsnyfawyqqkpgqaprlliydtskratgtpa
rfsgsgsgtdftltisslepedfavyycqernnwpltwtfglgtkveikrtvaapsvfif
ppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsst
ltlskadyekhkvyacevthqglsspvtksfnrge