PDB entry 6dcu

View 6dcu on RCSB PDB site
Description: Crystal structure of PPAR gamma co-crystallized with nTZDpa
Class: dna binding protein/agonist
Keywords: Nuclear receptor, Transcription factor, Super agonist, Ligand binding domain, Coactivator, MED1, DNA BINDING PROTEIN, dna binding protein-AGONIST complex
Deposited on 2018-05-08, released 2019-05-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-12-25, with a file datestamp of 2019-12-20.
Experiment type: XRAY
Resolution: 2.95 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peroxisome proliferator-activated receptor gamma
    Species: Homo sapiens [TaxId:9606]
    Gene: PPARG, NR1C3
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6dcua_
  • Chain 'B':
    Compound: Peroxisome proliferator-activated receptor gamma
    Species: Homo sapiens [TaxId:9606]
    Gene: PPARG, NR1C3
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6dcub_
  • Heterogens: NZA

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6dcuA (A:)
mahhhhhhvddddkmenlyfqgqlnpesadlralakhlydsyiksfpltkakarailtgk
ttdkspfviydmnslmmgedkikfkhitplqeqskevairifqgcqfrsveavqeiteya
ksipgfvnldlndqvtllkygvheiiytmlaslmnkdgvlisegqgfmtreflkslrkpf
gdfmepkfefavkfnalelddsdlaifiaviilsgdrpgllnvkpiediqdnllqalelq
lklnhpessqlfakllqkmtdlrqivtehvqllqvikktetdmslhpllqeiykdlylvp
r

    Sequence, based on observed residues (ATOM records): (download) 
    >6dcuA (A:)
pesadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgedkiqsk
evairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmn
kdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaifiaviilsg
drpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqv
ikktetdmslhpll

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6dcuB (B:)
mahhhhhhvddddkmenlyfqgqlnpesadlralakhlydsyiksfpltkakarailtgk
ttdkspfviydmnslmmgedkikfkhitplqeqskevairifqgcqfrsveavqeiteya
ksipgfvnldlndqvtllkygvheiiytmlaslmnkdgvlisegqgfmtreflkslrkpf
gdfmepkfefavkfnalelddsdlaifiaviilsgdrpgllnvkpiediqdnllqalelq
lklnhpessqlfakllqkmtdlrqivtehvqllqvikktetdmslhpllqeiykdlylvp
r

    Sequence, based on observed residues (ATOM records): (download) 
    >6dcuB (B:)
pesadlralakhlydsyiksfpltkakarailtgkspfviydmnslmmgedkievairif
qgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmnkdgvlis
egqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaifiaviilsgdrpglln
vkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqvikktetd
mslhpll