PDB entry 6dbe

View 6dbe on RCSB PDB site
Description: Crystal Structure of VHH R330
Class: immune system
Keywords: nanobody VHH Listeria, IMMUNE SYSTEM
Deposited on 2018-05-03, released 2018-07-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: N/A
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nanobody VHH R303
    Species: Lama glama [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 6DBE
    Domains in SCOPe 2.08: d6dbea_
  • Chain 'B':
    Compound: nanobody VHH R303
    Species: Lama glama [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 6DBE
    Domains in SCOPe 2.08: d6dbeb_
  • Heterogens: EPE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6dbeA (A:)
qvkleesggglvqaggslrlscaasgstfsiytmgwfrqapgkerefvadiswnggstyy
adsvkgrftiyrdnykntvylqmnslkpedtavyycnaddlmidrdywgqgtqvtvssgs
eqkliseedlnhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6dbeA (A:)
vkleesggglvqaggslrlscaasgtfsiytmgwfrqapgkerefvadiswnggstyyad
svkgrftiyrdnykntvylqmnslkpedtavyycnaddlmidrdywgqgtqvtvs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6dbeB (B:)
qvkleesggglvqaggslrlscaasgstfsiytmgwfrqapgkerefvadiswnggstyy
adsvkgrftiyrdnykntvylqmnslkpedtavyycnaddlmidrdywgqgtqvtvssgs
eqkliseedlnhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6dbeB (B:)
vkleesggglvqaggslrlscaasgssiytmgwfrqapgkerefvadiswnggstyyads
vkgrftiyrdnytvylqmnslkpedtavyycnaddlmidrdywgqgtqvtvss