PDB entry 6d64

View 6d64 on RCSB PDB site
Description: Crystal Structure of Human CD1b in Complex with POPC
Class: immune system
Keywords: BC8B, CD1, CD1b, PC, POPC, phosphatidylcholine, IMMUNE SYSTEM
Deposited on 2018-04-20, released 2019-01-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: T-cell surface glycoprotein cd1b
    Species: Homo sapiens [TaxId:9606]
    Gene: CD1B
    Database cross-references and differences (RAF-indexed):
    • Uniprot P29016 (Start-276)
      • expression tag (277-283)
    Domains in SCOPe 2.08: d6d64a1, d6d64a2, d6d64a3
  • Chain 'B':
    Compound: Beta-2-microglobulin
    Species: Homo sapiens [TaxId:9606]
    Gene: B2M, CDABP0092, HDCMA22P
    Database cross-references and differences (RAF-indexed):
    • Uniprot P61769 (2-End)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d6d64b1, d6d64b2
  • Heterogens: POV, CUY, CL, EDO, NA, IOD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6d64A (A:)
hafqgptsfhviqtssftnstwaqtqgsgwlddlqihgwdsdsgtaiflkpwskgnfsdk
evaeleeifrvyifgfarevqdfagdfqmkypfeiqgiagcelhsggaivsflrgalggl
dflsvknascvpspeggsraqkfcaliiqyqgimetvrillyetcpryllgvlnagkadl
qrqvkpeawlssgpspgpgrlqlvchvsgfypkpvwvmwmrgeqeqqgtqlgdilpnanw
twylratldvadgeaaglscrvkhsslegqdiilywrgsglndifeaqkiewhehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6d64A (A:)
fqgptsfhviqtssftnstwaqtqgsgwlddlqihgwdsdsgtaiflkpwskgnfsdkev
aeleeifrvyifgfarevqdfagdfqmkypfeiqgiagcelhsggaivsflrgalggldf
lsvknascvpspeggsraqkfcaliiqyqgimetvrillyetcpryllgvlnagkadlqr
qvkpeawlssgpspgpgrlqlvchvsgfypkpvwvmwmrgeqeqqgtqlgdilpnanwtw
ylratldvadgeaaglscrvkhsslegqdiilywrgsglndi

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6d64B (B:)
pkiqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfsk
dwsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm

    Sequence, based on observed residues (ATOM records): (download) 
    >6d64B (B:)
pkiqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfsk
dwsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrd