PDB entry 6d5c

View 6d5c on RCSB PDB site
Description: Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321
Class: hydrolase
Keywords: GH10, glycoside hydrolase, HYDROLASE
Deposited on 2018-04-19, released 2019-04-24
The last revision prior to the SCOPe 2.07 freeze date was dated 2019-04-24, with a file datestamp of 2019-04-19.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: glycoside hydrolase WP_045175321
    Species: Caldicellulosiruptor sp. Wai35.B1 [TaxId:1387557]
    Database cross-references and differences (RAF-indexed):
    • PDB 6D5C (Start-349)
    Domains in SCOPe 2.07: d6d5ca1, d6d5ca2
  • Chain 'B':
    Compound: glycoside hydrolase WP_045175321
    Species: Caldicellulosiruptor sp. Wai35.B1 [TaxId:1387557]
    Database cross-references and differences (RAF-indexed):
    • PDB 6D5C (Start-349)
    Domains in SCOPe 2.07: d6d5cb1, d6d5cb2
  • Chain 'C':
    Compound: glycoside hydrolase WP_045175321
    Species: Caldicellulosiruptor sp. Wai35.B1 [TaxId:1387557]
    Database cross-references and differences (RAF-indexed):
    • PDB 6D5C (Start-349)
    Domains in SCOPe 2.07: d6d5cc1, d6d5cc2
  • Heterogens: SO4, EDO, GOL, FMT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6d5cA (A:)
    mahhhhhhvddddkapdwsipslcesykddfiigvaiparclsndtdkrmvlkhfnsita
    enemkpesllagqtstglsyrfstadafvdfastnkigirghtlvwhnqtpdwffkdsng
    qrlskdallarlkqyiydvvgrykgkvyawdvvneaidenqsdgyrrstwyeicgpeyie
    kafiwaheadpnaklfyndynteiskkrefiynmvknlkskgipihgigmqchinvnwps
    vseiensiklfssipgieihiteldmslynygssenystppqdllqkqaqkykeiftmlk
    kyknvvksvtfwglkddyswlrsfygkndwpllffedysakpaywaviea
    

    Sequence, based on observed residues (ATOM records): (download)
    >6d5cA (A:)
    kapdwsipslcesykddfiigvaiparclsndtdkrmvlkhfnsitaenemkpesllagq
    tstglsyrfstadafvdfastnkigirghtlvwhnqtpdwffkdsngqrlskdallarlk
    qyiydvvgrykgkvyawdvvneaidenqsdgyrrstwyeicgpeyiekafiwaheadpna
    klfyndynteiskkrefiynmvknlkskgipihgigmqchinvnwpsvseiensiklfss
    ipgieihiteldmslynygssenystppqdllqkqaqkykeiftmlkkyknvvksvtfwg
    lkddyswlrsfygkndwpllffedysakpaywaviea
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >6d5cB (B:)
    mahhhhhhvddddkapdwsipslcesykddfiigvaiparclsndtdkrmvlkhfnsita
    enemkpesllagqtstglsyrfstadafvdfastnkigirghtlvwhnqtpdwffkdsng
    qrlskdallarlkqyiydvvgrykgkvyawdvvneaidenqsdgyrrstwyeicgpeyie
    kafiwaheadpnaklfyndynteiskkrefiynmvknlkskgipihgigmqchinvnwps
    vseiensiklfssipgieihiteldmslynygssenystppqdllqkqaqkykeiftmlk
    kyknvvksvtfwglkddyswlrsfygkndwpllffedysakpaywaviea
    

    Sequence, based on observed residues (ATOM records): (download)
    >6d5cB (B:)
    kapdwsipslcesykddfiigvaiparclsndtdkrmvlkhfnsitaenemkpesllagq
    tstglsyrfstadafvdfastnkigirghtlvwhnqtpdwffkdsngqrlskdallarlk
    qyiydvvgrykgkvyawdvvneaidenqsdgyrrstwyeicgpeyiekafiwaheadpna
    klfyndynteiskkrefiynmvknlkskgipihgigmqchinvnwpsvseiensiklfss
    ipgieihiteldmslynygssenystppqdllqkqaqkykeiftmlkkyknvvksvtfwg
    lkddyswlrsfygkndwpllffedysakpaywaviea
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >6d5cC (C:)
    mahhhhhhvddddkapdwsipslcesykddfiigvaiparclsndtdkrmvlkhfnsita
    enemkpesllagqtstglsyrfstadafvdfastnkigirghtlvwhnqtpdwffkdsng
    qrlskdallarlkqyiydvvgrykgkvyawdvvneaidenqsdgyrrstwyeicgpeyie
    kafiwaheadpnaklfyndynteiskkrefiynmvknlkskgipihgigmqchinvnwps
    vseiensiklfssipgieihiteldmslynygssenystppqdllqkqaqkykeiftmlk
    kyknvvksvtfwglkddyswlrsfygkndwpllffedysakpaywaviea
    

    Sequence, based on observed residues (ATOM records): (download)
    >6d5cC (C:)
    kapdwsipslcesykddfiigvaiparclsndtdkrmvlkhfnsitaenemkpesllagq
    tstglsyrfstadafvdfastnkigirghtlvwhnqtpdwffkdsngqrlskdallarlk
    qyiydvvgrykgkvyawdvvneaidenqsdgyrrstwyeicgpeyiekafiwaheadpna
    klfyndynteiskkrefiynmvknlkskgipihgigmqchinvnwpsvseiensiklfss
    ipgieihiteldmslynygssenystppqdllqkqaqkykeiftmlkkyknvvksvtfwg
    lkddyswlrsfygkndwpllffedysakpaywaviea