PDB entry 6cwt

View 6cwt on RCSB PDB site
Description: Hepatitis B core-antigen in complex with Fab e21
Class: viral protein/immune system
Keywords: Hepatitis B virus, Fab, Core dimer, Nucleocapsid, VIRAL PROTEIN, VIRAL PROTEIN-IMMUNE SYSTEM complex
Deposited on 2018-03-30, released 2018-08-29
The last revision prior to the SCOPe 2.07 freeze date was dated 2018-08-29, with a file datestamp of 2018-08-24.
Experiment type: XRAY
Resolution: 3.15 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fab e21 heavy chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed):
    • PDB 6CWT
  • Chain 'B':
    Compound: Fab e21 light chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed):
    • PDB 6CWT (Start-209)
    Domains in SCOPe 2.07: d6cwtb1, d6cwtb2
  • Chain 'C':
    Compound: Fab e21 heavy chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed):
    • PDB 6CWT
  • Chain 'D':
    Compound: Fab e21 light chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed):
    • PDB 6CWT
    Domains in SCOPe 2.07: d6cwtd1, d6cwtd2
  • Chain 'E':
    Compound: capsid protein
    Species: Hepatitis B virus genotype D subtype adw [TaxId:10419]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03147
      • engineered mutation (47)
      • engineered mutation (106)
    Domains in SCOPe 2.07: d6cwte_
  • Chain 'F':
    Compound: capsid protein
    Species: Hepatitis B virus genotype D subtype adw [TaxId:10419]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03147
      • engineered mutation (47)
      • engineered mutation (106)
    Domains in SCOPe 2.07: d6cwtf_

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6cwtB (B:)
aelvmtqtpsstsaavggtvtincqasqsignalawyqqkpgqppkllisagsnlasgvp
srfrgsgsgteytltisdvqredaatyyclgtysaidrafgagtnveiertvaapsvfif
ppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsst
ltlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >6cwtB (B:)
elvmtqtpsstsaavggtvtincqasqsignalawyqqkpgqppkllisagsnlasgvps
rfrgsgsgteytltisdvqredaatyyclgtysaidrafgagtnveiertvaapsvfifp
psdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyekhkvyacevthqglsspvtksfnrge

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6cwtD (D:)
aelvmtqtpsstsaavggtvtincqasqsignalawyqqkpgqppkllisagsnlasgvp
srfrgsgsgteytltisdvqredaatyyclgtysaidrafgagtnveiertvaapsvfif
ppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsst
ltlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >6cwtD (D:)
elvmtqtpsstsaavggtvtincqasqsignalawyqqkpgqppkllisagsnlasgvps
rfrgsgsgteytltisdvqredaatyyclgtysaidrafgagtnveiertvaapsvfifp
psdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyacevthqglsspvtksfnrge

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6cwtE (E:)
mdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehasphhtalrqail
cwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhisaltfgretvleylv
sfgvwirtppayrppnapilstlpettvv

    Sequence, based on observed residues (ATOM records): (download) 
    >6cwtE (E:)
idpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehasphhtalrqailcw
gdlmtlatwvgsyvntnvglkfrqllwfhisaltfgretvleylvsfgvwirtppayrpp
napi

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6cwtF (F:)
mdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehasphhtalrqail
cwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhisaltfgretvleylv
sfgvwirtppayrppnapilstlpettvv

    Sequence, based on observed residues (ATOM records): (download) 
    >6cwtF (F:)
idpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehasphhtalrqailcw
gdlmtlatwvgntnvglkfrqllwfhisaltfgretvleylvsfgvwirtppayrppnap
i