PDB entry 6cv4

View 6cv4 on RCSB PDB site
Description: CryoEM structure of human enterovirus D68 emptied particle (after incubation with low molecular weight heparin)
Class: virus
Keywords: virus, genome release, receptor
Deposited on 2018-03-27, released 2019-07-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-12-18, with a file datestamp of 2019-12-13.
Experiment type: EM
Resolution: 3.03 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: viral protein 1
    Species: Enterovirus D68 [TaxId:42789]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: viral protein 3
    Species: Enterovirus D68 [TaxId:42789]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6cv4b_
  • Chain 'C':
    Compound: viral protein 2
    Species: Enterovirus D68 [TaxId:42789]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >6cv4B (B:)
    gvptyllpgsgqflttddhssapvlpcfnptpemhipgqvrnmlevvqvesmmeinntes
    avgmerlkvdisaltdvdqllfnipldiqldgplrntlvgnisryythwsgslemtfmfc
    gsfmatgklilcytppggscpttretamlgthivwdfglqssvtliipwisgshyrmfnn
    dakstnanvgyvtcfmqtnlivpsessdtcsligfiaakddfslrlmrdspdigqidhlh
    aaeaayq
    

    Sequence, based on observed residues (ATOM records): (download)
    >6cv4B (B:)
    gvptyllpgsgqflttddhssapvlpcfnptpemhipgqvrnmlevvqvesmmeinntes
    avgmerlkvdisaltdvdqllfnipldiqldgplrntlvgnisryythwsgslemtfmfc
    gsfmatgklilcytppggscpttretamlgthivwdfglqssvtliipwisgshyranvg
    yvtcfmqtnlivpsessdtcsligfiaakddfslrlmrdspdigqhlhaaeaay
    

  • Chain 'C':
    No sequence available.