PDB entry 6cp2

View 6cp2 on RCSB PDB site
Description: SidC in complex with UbcH7~Ub
Class: ligase
Keywords: Bacterial E3 Ligase, E2, Ubiquitin, LIGASE
Deposited on 2018-03-13, released 2018-08-01
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: SidC
    Species: Legionella pneumophila [TaxId:446]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6RCR4
      • engineered mutation (45)
  • Chain 'B':
    Compound: Ubiquitin-conjugating enzyme E2 L3
    Species: Homo sapiens [TaxId:9606]
    Gene: UBE2L3, UBCE7, UBCH7
    Database cross-references and differences (RAF-indexed):
    • Uniprot P68036 (0-End)
      • engineered mutation (85)
    Domains in SCOPe 2.08: d6cp2b_
  • Chain 'C':
    Compound: Polyubiquitin-B
    Species: Homo sapiens [TaxId:9606]
    Gene: UBB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0CG47 (0-77)
      • conflict (1)
    Domains in SCOPe 2.08: d6cp2c_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >6cp2B (B:)
    maasrrlmkeleeirkcgmknfrniqvdeanlltwqglivpdnppydkgafrieinfpae
    ypfkppkitfktkiyhpnidekgqvklpvisaenwkpatktdqviqslialvndpqpehp
    lradlaeeyskdrkkfcknaeeftkkygekrpvd
    

    Sequence, based on observed residues (ATOM records): (download)
    >6cp2B (B:)
    maasrrlmkeleeirkcgmknfrniqvdeanlltwqglivpdnppydkgafrieinfpae
    ypfkppkitfktkiyhpnidekgqvklpvisaenwkpatktdqviqslialvndpqpehp
    lradlaeeyskdrkkfcknaeeftkkygekrpv
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6cp2C (C:)
    gsmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsd
    yniqkestlhlvlrlrgg