PDB entry 6cog
View 6cog on RCSB PDB site
Description: AtHNL enantioselectivity mutant At-A9-H7 Apo, Y13C,Y121L,P126F,L128W,C131T,A209I with benzaldehyde
Class: lyase
Keywords: alpha beta hydrolase globular hydroxynitrile lyase, LYASE
Deposited on
2018-03-12, released
2019-03-20
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-01-01, with a file datestamp of
2019-12-27.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.37
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Alpha-hydroxynitrile lyase
Species: Arabidopsis thaliana [TaxId:3702]
Gene: HNL, MES5, At5g10300, F18D22_70
Database cross-references and differences (RAF-indexed):
- Uniprot Q9LFT6 (0-257)
- engineered mutation (13)
- engineered mutation (121)
- engineered mutation (125)
- engineered mutation (128)
- engineered mutation (131)
- engineered mutation (209)
- expression tag (258)
Domains in SCOPe 2.08: d6coga1, d6coga2 - Chain 'B':
Compound: Alpha-hydroxynitrile lyase
Species: Arabidopsis thaliana [TaxId:3702]
Gene: HNL, MES5, At5g10300, F18D22_70
Database cross-references and differences (RAF-indexed):
- Uniprot Q9LFT6 (0-257)
- engineered mutation (13)
- engineered mutation (121)
- engineered mutation (125)
- engineered mutation (128)
- engineered mutation (131)
- engineered mutation (209)
- expression tag (258)
Domains in SCOPe 2.08: d6cogb1, d6cogb2 - Heterogens: HBX, GOL, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6cogA (A:)
merkhhfvlvhnachgawiwyklkpllesaghrvtavelaasgidprpiqavetvdeysk
plietlkslpeneevilvgfsfgginialaadifpakikvlvflnaflpdtthvpshvld
klmemfggwgdtefsshetrngtmsllkmgpkfmkarlyqncpiedyelakmlhrqgsff
tedlskkekfseegygsvqrvyvmssedkiipcdfirwmidnfnvskvyeidggdhmvml
skpqklfdslsaiatdymgl
Sequence, based on observed residues (ATOM records): (download)
>6cogA (A:)
merkhhfvlvhnachgawiwyklkpllesaghrvtavelaasgidprpiqavetvdeysk
plietlkslpeneevilvgfsfgginialaadifpakikvlvflnaflpdtthvpshvld
klmemfggwgdtefsshetrngtmsllkmgpkfmkarlyqncpiedyelakmlhrqgsff
tedlskkekfseegygsvqrvyvmssedkiipcdfirwmidnfnvskvyeidggdhmvml
skpqklfdslsaiatdymg
- Chain 'B':
Sequence, based on SEQRES records: (download)
>6cogB (B:)
merkhhfvlvhnachgawiwyklkpllesaghrvtavelaasgidprpiqavetvdeysk
plietlkslpeneevilvgfsfgginialaadifpakikvlvflnaflpdtthvpshvld
klmemfggwgdtefsshetrngtmsllkmgpkfmkarlyqncpiedyelakmlhrqgsff
tedlskkekfseegygsvqrvyvmssedkiipcdfirwmidnfnvskvyeidggdhmvml
skpqklfdslsaiatdymgl
Sequence, based on observed residues (ATOM records): (download)
>6cogB (B:)
merkhhfvlvhnachgawiwyklkpllesaghrvtavelaasgidprpiqavetvdeysk
plietlkslpeneevilvgfsfgginialaadifpakikvlvflnaflpdtthvpshvld
klmemfggwgdtefsshetrngtmsllkmgpkfmkarlyqncpiedyelakmlhrqgsff
tedlskkekfseegygsvqrvyvmssedkiipcdfirwmidnfnvskvyeidggdhmvml
skpqklfdslsaiatdymg