PDB entry 6cjk

View 6cjk on RCSB PDB site
Description: Anti HIV Fab 10A
Class: immune system
Keywords: Fab, HIV, IMMUNE SYSTEM
Deposited on 2018-02-26, released 2018-08-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-12-18, with a file datestamp of 2019-12-13.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Immunoglobulin Fab light chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed):
    • PDB 6CJK (Start-216)
    Domains in SCOPe 2.08: d6cjka1, d6cjka2
  • Chain 'B':
    Compound: Immunoglobulin Fab heavy chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed):
    • PDB 6CJK (0-End)
    Domains in SCOPe 2.08: d6cjkb_
  • Chain 'C':
    Compound: Immunoglobulin Fab light chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed):
    • PDB 6CJK (0-216)
    Domains in SCOPe 2.08: d6cjkc1, d6cjkc2
  • Chain 'D':
    Compound: Immunoglobulin Fab heavy chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed):
    • PDB 6CJK (0-End)
    Domains in SCOPe 2.08: d6cjkd_
  • Heterogens: ACT, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6cjkA (A:)
divmtqtpasveaavggtvaikcqasqsirsylawyqqkpgqppklliyeasklasgvps
rfsgsgsgtqftltisgvecddaatyycqrnydsysgayypngfgggtevvvkgdpvaps
vlifppaadqvatgtvtivcvankyfpdvtvtwevdgttqttgiensktpqnsadctynl
sstltltstqynshkeytckvtqgttsvvqsfnrgdc

    Sequence, based on observed residues (ATOM records): (download) 
    >6cjkA (A:)
ivmtqtpasveaavggtvaikcqasqsirsylawyqqkpgqppklliyeasklasgvpsr
fsgsgsgtqftltisgvecddaatyycqrnydsysgayypngfgggtevvvkgdpvapsv
lifppaadqvatgtvtivcvankyfpdvtvtwevdgttqttgiensktpqnsadctynls
stltltstqynshkeytckvtqgttsvvqsfnrgdc

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6cjkB (B:)
elvesggglvqpgasltltctasgfsfssdyymcwvrqapgkglewiaciwtansisyya
rwakgrftisktssttvtlqmtsltaadtatyfcarggsgdgqslwgpgtlvtvssgqpk
apsvfplapccgdtpsstvtlgclvkgylpepvtvtwnsgtltngvrtfpsvrqssglys
lssvvsvtsssqpvtcnvahpatntkvdktvapstcshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6cjkB (B:)
elvesggglvqpgasltltctasgfsfssdyymcwvrqapgkglewiaciwtansisyya
rwakgrftisktssttvtlqmtsltaadtatyfcarggsgdgqslwgpgtlvtvssgqpk
apsvfplapcsstvtlgclvkgylpepvtvtwnsgtltngvrtfpsvrqssglyslssvv
svtsssqpvtcnvahpatntkvdktvaps

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6cjkC (C:)
divmtqtpasveaavggtvaikcqasqsirsylawyqqkpgqppklliyeasklasgvps
rfsgsgsgtqftltisgvecddaatyycqrnydsysgayypngfgggtevvvkgdpvaps
vlifppaadqvatgtvtivcvankyfpdvtvtwevdgttqttgiensktpqnsadctynl
sstltltstqynshkeytckvtqgttsvvqsfnrgdc

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6cjkD (D:)
elvesggglvqpgasltltctasgfsfssdyymcwvrqapgkglewiaciwtansisyya
rwakgrftisktssttvtlqmtsltaadtatyfcarggsgdgqslwgpgtlvtvssgqpk
apsvfplapccgdtpsstvtlgclvkgylpepvtvtwnsgtltngvrtfpsvrqssglys
lssvvsvtsssqpvtcnvahpatntkvdktvapstcshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6cjkD (D:)
elvesggglvqpgasltltctasgfsfssdyymcwvrqapgkglewiaciwtansisyya
rwakgrftisktssttvtlqmtsltaadtatyfcarggsgdgqslwgpgtlvtvssgqpk
apsvfplapccgdtpsstvtlgclvkgylpepvtvtwnsgtltngvrtfpsvrqssglys
lssvvsvtsssqpvtcnvahpatntkvdktvap