PDB entry 6cdq

View 6cdq on RCSB PDB site
Description: Crystal structure of the W202F variant of catalase-peroxidase from B. pseudomallei with INH bound.
Class: oxidoreductase/oxidoreductase inhibitor
Keywords: catalase, peroxidase, W202F, heme, INH, oxidoreductase-oxidoreductase inhibitor complex
Deposited on 2018-02-09, released 2018-02-21
The last revision prior to the SCOPe 2.07 freeze date was dated 2018-02-21, with a file datestamp of 2018-02-16.
Experiment type: XRAY
Resolution: 1.92 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Catalase-peroxidase
    Species: Burkholderia pseudomallei (strain 1710b) [TaxId:320372]
    Gene: katG, BURPS1710b_3366
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q3JNW6 (Start-727)
      • engineered mutation (181)
    Domains in SCOPe 2.07: d6cdqa1, d6cdqa2
  • Chain 'B':
    Compound: Catalase-peroxidase
    Species: Burkholderia pseudomallei (strain 1710b) [TaxId:320372]
    Gene: katG, BURPS1710b_3366
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q3JNW6 (Start-727)
      • engineered mutation (181)
    Domains in SCOPe 2.07: d6cdqb1, d6cdqb2
  • Heterogens: HEM, NA, CL, OXY, PO4, MPD, NIZ, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6cdqA (A:)
msneakcpfhqaagngtsnrdwwpnqldlsilhrhsslsdpmgkdfnyaqafekldlaav
krdlhalmttsqdwwpadfghygglfirmawhsagtyrtadgrggagegqqrfaplnswp
dnanldkarrllwpikqkygraiswadlliltgnvalesmgfktfgfaggradtwepedv
yfgsekiwlelsggpnsrysgdrqlenplaavqmgliyvnpegpdgnpdpvaaardirdt
farmamndeetvaliagghtfgkthgagpasnvgaepeaagieaqglgwksayrtgkgad
aitsglevtwtttptqwshnffenlfgyeweltkspagahqwvakgadavipdafdpskk
hrptmlttdlslrfdpayekisrrfhenpeqfadafarawfklthrdmgprarylgpevp
aevllwqdpipavdhplidaadaaelkakvlasgltvsqlvstawaaastfrgsdkrgga
ngarirlapqkdweanqpeqlaavletleairtafngaqrggkqvsladlivlagcagve
qaaknaghavtvpfapgradasqeqtdvesmavlepvadgfrnylkgkyrvpaevllvdk
aqlltlsapemtvllgglrvlganvgqsrhgvftareqaltndffvnlldmgtewkptaa
dadvfegrdratgelkwtgtrvdlvfgshsqlralaevygsadaqekfvrdfvavwnkvm
nldrfdla

    Sequence, based on observed residues (ATOM records): (download) 
    >6cdqA (A:)
gtsnrdwwpnqldlsilhrhsslsdpmgkdfnyaqafekldlaavkrdlhalmttsqdww
padfghygglfirmawhsagtyrtadgrggagegqqrfaplnswpdnanldkarrllwpi
kqkygraiswadlliltgnvalesmgfktfgfaggradtwepedvyfgsekiwlelsggp
nsrysgdrqlenplaavqmgliyvnpegpdgnpdpvaaardirdtfarmamndeetvali
agghtfgkthgagpasnvgaepeaagieaqglgwksayrtgkgadaitsglevtwtttpt
qwshnffenlfgyeweltkspagahqwvakgadavipdafdpskkhrptmlttdlslrfd
payekisrrfhenpeqfadafarawfklthrdmgprarylgpevpaevllwqdpipavdh
plidaadaaelkakvlasgltvsqlvstawaaastfrgsdkrggangarirlapqkdwea
nqpeqlaavletleairtafngaqrggkqvsladlivlagcagveqaaknaghavtvpfa
pgradasqeqtdvesmavlepvadgfrnylkgkyrvpaevllvdkaqlltlsapemtvll
gglrvlganvgqsrhgvftareqaltndffvnlldmgtewkptaadadvfegrdratgel
kwtgtrvdlvfgshsqlralaevygsadaqekfvrdfvavwnkvmnldrfdla

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6cdqB (B:)
msneakcpfhqaagngtsnrdwwpnqldlsilhrhsslsdpmgkdfnyaqafekldlaav
krdlhalmttsqdwwpadfghygglfirmawhsagtyrtadgrggagegqqrfaplnswp
dnanldkarrllwpikqkygraiswadlliltgnvalesmgfktfgfaggradtwepedv
yfgsekiwlelsggpnsrysgdrqlenplaavqmgliyvnpegpdgnpdpvaaardirdt
farmamndeetvaliagghtfgkthgagpasnvgaepeaagieaqglgwksayrtgkgad
aitsglevtwtttptqwshnffenlfgyeweltkspagahqwvakgadavipdafdpskk
hrptmlttdlslrfdpayekisrrfhenpeqfadafarawfklthrdmgprarylgpevp
aevllwqdpipavdhplidaadaaelkakvlasgltvsqlvstawaaastfrgsdkrgga
ngarirlapqkdweanqpeqlaavletleairtafngaqrggkqvsladlivlagcagve
qaaknaghavtvpfapgradasqeqtdvesmavlepvadgfrnylkgkyrvpaevllvdk
aqlltlsapemtvllgglrvlganvgqsrhgvftareqaltndffvnlldmgtewkptaa
dadvfegrdratgelkwtgtrvdlvfgshsqlralaevygsadaqekfvrdfvavwnkvm
nldrfdla

    Sequence, based on observed residues (ATOM records): (download) 
    >6cdqB (B:)
gtsnrdwwpnqldlsilhrhsslsdpmgkdfnyaqafekldlaavkrdlhalmttsqdww
padfghygglfirmawhsagtyrtadgrggagegqqrfaplnswpdnanldkarrllwpi
kqkygraiswadlliltgnvalesmgfktfgfaggradtwepedvyfgsekiwlelsggp
nsrysgdrqlenplaavqmgliyvnpegpdgnpdpvaaardirdtfarmamndeetvali
agghtfgkthgagpasnvgaepeaagieaqglgwksayrtgkgadaitsglevtwtttpt
qwshnffenlfgyeweltkspagahqwvakgadavipdafdpskkhrptmlttdlslrfd
payekisrrfhenpeqfadafarawfklthrdmgprarylgpevpaevllwqdpipavdh
plidaadaaelkakvlasgltvsqlvstawaaastfrgsdkrggangarirlapqkdwea
nqpeqlaavletleairtafngaqrggkqvsladlivlagcagveqaaknaghavtvpfa
pgradasqeqtdvesmavlepvadgfrnylkgkyrvpaevllvdkaqlltlsapemtvll
gglrvlganvgqsrhgvftareqaltndffvnlldmgtewkptaadadvfegrdratgel
kwtgtrvdlvfgshsqlralaevygsadaqekfvrdfvavwnkvmnldrfdla