PDB entry 6c8r

View 6c8r on RCSB PDB site
Description: Loganic acid O-methyltransferase complexed with SAH and loganic acid
Class: transferase
Keywords: methyltransferase, SABATH, loganic acid, TRANSFERASE
Deposited on 2018-01-25, released 2018-02-07
The last revision prior to the SCOPe 2.07 freeze date was dated 2018-02-21, with a file datestamp of 2018-02-16.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Loganic acid O-methyltransferase
    Species: Catharanthus roseus [TaxId:4058]
    Database cross-references and differences (RAF-indexed):
    • Uniprot B2KPR3 (Start-370)
      • expression tag (371-373)
    Domains in SCOPe 2.07: d6c8ra1, d6c8ra2
  • Chain 'B':
    Compound: Loganic acid O-methyltransferase
    Species: Catharanthus roseus [TaxId:4058]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6c8rb_
  • Heterogens: SAH, EQV, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6c8rA (A:)
mvatidsiempalptaveahpmkggddshsysqnscyqkgvidaakaviveavnekldle
nnpifdpikpfriadfgcstgpntfhamqnivesvetkykslqktpefhvffndhvnndf
nvlfrslppnreffaagvpgsfytrvfpknsihfahcsyalhwlskvpkeiqdknslayn
kgrihytgtekhvvkayfgqfqrdfegflkaraqeivvgglmviqipglpsgevlfsrtg
agllhfllgtslmelvnkgiineesvdsfnlpqyhpsvedlemviemndcftiervgtlp
hpmknlpfdvqrtslqvraimeciltehfgenildplfeiytknlqenfhvfdkeirkda
dlylvlkrkgnlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6c8rA (A:)
veahpmkggddshsysqnscyqkgvidaakaviveavnekldlennpifdpikpfriadf
gcstgpntfhamqnivesvetkykslqktpefhvffndhvnndfnvlfrslppnreffaa
gvpgsfytrvfpknsihfahcsyalhwlskvpkeiqdknslaynkgrihytgtekhvvka
yfgqfqrdfegflkaraqeivvgglmviqipglpsgevlfsrtgagllhfllgtslmelv
nkgiineesvdsfnlpqyhpsvedlemviemndcftiervgtlphpmknlpfdvqrtslq
vraimeciltehfgenildplfeiytknlqenfhvfdkeirkdadlylvlkrkgnleh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6c8rB (B:)
mvatidsiempalptaveahpmkggddshsysqnscyqkgvidaakaviveavnekldle
nnpifdpikpfriadfgcstgpntfhamqnivesvetkykslqktpefhvffndhvnndf
nvlfrslppnreffaagvpgsfytrvfpknsihfahcsyalhwlskvpkeiqdknslayn
kgrihytgtekhvvkayfgqfqrdfegflkaraqeivvgglmviqipglpsgevlfsrtg
agllhfllgtslmelvnkgiineesvdsfnlpqyhpsvedlemviemndcftiervgtlp
hpmknlpfdvqrtslqvraimeciltehfgenildplfeiytknlqenfhvfdkeirkda
dlylvlkrkgnlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6c8rB (B:)
aveahpmkggddshsysqnscyqkgvidaakaviveavnekldlennpifdpikpfriad
fgcstgpntfhamqnivesvetkykslqktpefhvffndhvnndfnvlfrslppnreffa
agvpgsfytrvfpknsihfahcsyalhwlskvpkeiqdknslaynkgrihytgtekhvvk
ayfgqfqrdfegflkaraqeivvgglmviqipglpsgevlfsrtgagllhfllgtslmel
vnkgiineesvdsfnlpqyhpsvedlemviemndcftiervgtlphpmknlpfdvqrtsl
qvraimeciltehfgenildplfeiytknlqenfhvfdkeirkdadlylvlkrkgn