PDB entry 6c39

View 6c39 on RCSB PDB site
Description: Apo crystal structure of wild-type S. aureus penicillin binding protein 4 (PBP4)
Class: hydrolase
Keywords: Hydrolase, Penicillin binding protein
Deposited on 2018-01-09, released 2018-11-07
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-01-02, with a file datestamp of 2018-12-28.
Experiment type: XRAY
Resolution: 1.69 Å
R-factor: N/A
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Serine-type D-Ala-D-Ala carboxypeptidase
    Species: Staphylococcus aureus [TaxId:1280]
    Gene: HMPREF3211_00659
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6c39a1, d6c39a2
  • Chain 'B':
    Compound: Serine-type D-Ala-D-Ala carboxypeptidase
    Species: Staphylococcus aureus [TaxId:1280]
    Gene: HMPREF3211_00659
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6c39b1, d6c39b2
  • Heterogens: ZN, NA, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6c39A (A:)
gshmyaqatnsdvtpvqaanqygyaglsaayeptsavnvsqtgqllyqynidtkwnpasm
tklmtmyltleavnkgqlslddtvtmtnkeyimstlpelsntklypgqvwtiadllqitv
snssnaaalilakkvskntsdfvdlmnnkakaigmknthfvnptgaensrlrtfaptkyk
dqertvttardyaildlhviketpkildftkqlaptthavtyytfnfslegakmslpgtd
glktgssdtanynhtittkrgkfrinqvimgagdyknlggekqrnmmgnalmersfdqyk
yvkilskgeqringkkyyvendlydvlpsdfskkdyklvvedgkvhadyprefinkdygp
ptvevhq

    Sequence, based on observed residues (ATOM records): (download) 
    >6c39A (A:)
tnsdvtpvqaanqygyaglsaayeptsavnvsqtgqllyqynidtkwnpasmtklmtmyl
tleavnkgqlslddtvtmtnkeyimstlpelsntklypgqvwtiadllqitvsnssnaaa
lilakkvskntsdfvdlmnnkakaigmknthfvnptgaensrlrtfaptkykdqertvtt
ardyaildlhviketpkildftkqlaptthavtyytfnfslegakmslpgtdglktgssd
tanynhtittkrgkfrinqvimgagdyknlggekqrnmmgnalmersfdqykyvkilskg
eqringkkyyvendlydvlpsdfskkdyklvvedgkvhadyprefinkdygpptvevhq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6c39B (B:)
gshmyaqatnsdvtpvqaanqygyaglsaayeptsavnvsqtgqllyqynidtkwnpasm
tklmtmyltleavnkgqlslddtvtmtnkeyimstlpelsntklypgqvwtiadllqitv
snssnaaalilakkvskntsdfvdlmnnkakaigmknthfvnptgaensrlrtfaptkyk
dqertvttardyaildlhviketpkildftkqlaptthavtyytfnfslegakmslpgtd
glktgssdtanynhtittkrgkfrinqvimgagdyknlggekqrnmmgnalmersfdqyk
yvkilskgeqringkkyyvendlydvlpsdfskkdyklvvedgkvhadyprefinkdygp
ptvevhq

    Sequence, based on observed residues (ATOM records): (download) 
    >6c39B (B:)
tnsdvtpvqaanqygyaglsaayeptsavnvsqtgqllyqynidtkwnpasmtklmtmyl
tleavnkgqlslddtvtmtnkeyimstlpelsntklypgqvwtiadllqitvsnssnaaa
lilakkvskntsdfvdlmnnkakaigmknthfvnptgaensrlrtfaptkykdqertvtt
ardyaildlhviketpkildftkqlaptthavtyytfnfslegakmslpgtdglktgssd
tanynhtittkrgkfrinqvimgagdyknlggekqrnmmgnalmersfdqykyvkilskg
eqringkkyyvendlydvlpsdfskkdyklvvedgkvhadyprefinkdygpptvevhq