PDB entry 6c12

View 6c12 on RCSB PDB site
Description: SDHA-SDHE complex
Class: Oxidoreductase/Chaperon
Keywords: Succinate dehydrogenase, Assembly factor, Oxidoreductase-Chaperon complex
Deposited on 2018-01-03, released 2018-03-07
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Succinate dehydrogenase flavoprotein subunit
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: sdhA, b0723, JW0713
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6c12a1, d6c12a2, d6c12a3
  • Chain 'B':
    Compound: Succinate dehydrogenase flavoprotein subunit
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: sdhA, b0723, JW0713
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6c12b1, d6c12b2, d6c12b3
  • Chain 'C':
    Compound: FAD assembly factor SdhE
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: sdhE, cptB, ygfY, b2897, JW2865
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6c12c_
  • Chain 'D':
    Compound: FAD assembly factor SdhE
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: sdhE, cptB, ygfY, b2897, JW2865
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6c12d_
  • Heterogens: FAD, NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6c12A (A:)
mklpvrefdavvigaggagmraalqisqsgqtcallskvfptrshtvsaqggitvalgnt
hednwewhmydtvkgsdyigdqdaieymcktgpeailelehmglpfsrlddgriyqrpfg
gqsknfggeqaartaaaadrtghallhtlyqqnlknhttifsewyaldlvknqdgavvgc
talcietgevvyfkaratvlatggagriyqsttnahintgdgvgmairagvpvqdmemwq
fhptgiagagvlvtegcrgeggyllnkhgerfmeryapnakdlagrdvvarsimieireg
rgcdgpwgphaklkldhlgkevlesrlpgilelsrtfahvdpvkepipviptchymmggi
ptkvtgqaltvnekgedvvvpglfavgeiacvsvhganrlggnslldlvvfgraaglhlq
esiaeqgalrdasesdveasldrlnrwnnnrngedpvairkalqecmqhnfsvfregdam
akgleqlkvirerlknarlddtssefntqrvecleldnlmetayatavsanfrtesrgah
srfdfpdrddenwlchslylpesesmtrrsvnmepklrpafppkirty

    Sequence, based on observed residues (ATOM records): (download) 
    >6c12A (A:)
mklpvrefdavvigaggagmraalqisqsgqtcallskvfptrshtvsaqghmydtvkgs
dyigdqdaieymcktgpeailelehmglpfadrtghallhtlyqqnlknhttifsewyal
dlvknqdgavvgctalcietgevvyfkaratvlatggagriyqsttnahintgdgvgmai
ragvpvqdmemwqfhptgiagagvlvtegcrgeggyllnkhgerfmeryapnakdlagrd
vvarsimieiregrgcdgpwgphaklkldhlgkevlesrlpgilelsrtfahvdpvkepi
pviptchymmggiptkvtgqaltvnekgedvvvpglfavgeiacvsvhganrlggnslld
lvvfgraaglhlqesiaeqgalrdasesdveasldrlnrwnnnrngedpvairkalqecm
qhnfsvfregdamakgleqlkvirerlknarlddtssefntqrvecleldnlmetayata
vsanfrtesrgahsrfdfpdrddenwlchslylpesesmtrrsvnmepklrpafpp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6c12B (B:)
mklpvrefdavvigaggagmraalqisqsgqtcallskvfptrshtvsaqggitvalgnt
hednwewhmydtvkgsdyigdqdaieymcktgpeailelehmglpfsrlddgriyqrpfg
gqsknfggeqaartaaaadrtghallhtlyqqnlknhttifsewyaldlvknqdgavvgc
talcietgevvyfkaratvlatggagriyqsttnahintgdgvgmairagvpvqdmemwq
fhptgiagagvlvtegcrgeggyllnkhgerfmeryapnakdlagrdvvarsimieireg
rgcdgpwgphaklkldhlgkevlesrlpgilelsrtfahvdpvkepipviptchymmggi
ptkvtgqaltvnekgedvvvpglfavgeiacvsvhganrlggnslldlvvfgraaglhlq
esiaeqgalrdasesdveasldrlnrwnnnrngedpvairkalqecmqhnfsvfregdam
akgleqlkvirerlknarlddtssefntqrvecleldnlmetayatavsanfrtesrgah
srfdfpdrddenwlchslylpesesmtrrsvnmepklrpafppkirty

    Sequence, based on observed residues (ATOM records): (download) 
    >6c12B (B:)
mklpvrefdavvigaggagmraalqisqsgqtcallskvfptrshtvsaqggnwewhmyd
tvkgsdyigdqdaieymcktgpeailelehmadrtghallhtlyqqnlknhttifsewya
ldlvknqdgavvgctalcietgevvyfkaratvlatggagriyqsttnahintgdgvgma
iragvpvqdmemwqfhptgiagagvlvtegcrgeggyllnkhgerfmeryapnakdlagr
dvvarsimieiregrgcdgpwgphaklkldhlgkevlesrlpgilelsrtfahvdpvkep
ipviptchymmggiptkvtgqaltvnekgedvvvpglfavgeiacvsvhganrlggnsll
dlvvfgraaglhlqesiaeqgalrdasesdveasldrlnrwnnnrngedpvairkalqec
mqhnfsvfregdamakgleqlkvirerlknarlddtssefntqrvecleldnlmetayat
avsanfrtesrgahsrfdfpdrddenwlchslylpesesmtrrsvnmepklrpafpp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6c12C (C:)
mgsshhhhhhsqdpdinnkarihwacrrgmreldisimpffeheydslsddekrifirll
ecddpdlfnwlmnhgkpadaelemmvrliqtrnrergpvai

    Sequence, based on observed residues (ATOM records): (download) 
    >6c12C (C:)
dinnkarihwacrrgmreldisimpffeheydslsddekrifirllecddpdlfnwlmnh
gkpadaelemmvrliqtrnrergpv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6c12D (D:)
mgsshhhhhhsqdpdinnkarihwacrrgmreldisimpffeheydslsddekrifirll
ecddpdlfnwlmnhgkpadaelemmvrliqtrnrergpvai

    Sequence, based on observed residues (ATOM records): (download) 
    >6c12D (D:)
dinnkarihwacrrgmreldisimpffeheydslsddekrifirllecddpdlfnwlmnh
gkpadaelemmvrliqtrnrergpva