PDB entry 6bpp

View 6bpp on RCSB PDB site
Description: E. coli MsbA in complex with LPS and inhibitor G092
Class: lipid transport
Keywords: ABC transporter, inhibitor, LPS, MsbA, LIPID TRANSPORT
Deposited on 2017-11-24, released 2018-05-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.92 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Lipid A export ATP-binding/permease protein msbA
    Species: Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) [TaxId:199310]
    Gene: msbA, c1054
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8FJB1
      • conflict (64)
      • conflict (83)
    Domains in SCOPe 2.08: d6bppa1, d6bppa2
  • Chain 'B':
    Compound: Lipid A export ATP-binding/permease protein msbA
    Species: Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) [TaxId:199310]
    Gene: msbA, c1054
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8FJB1
      • conflict (64)
      • conflict (83)
    Domains in SCOPe 2.08: d6bppb1, d6bppb2
  • Heterogens: E1M, FTT, DAO, 3PE, PO4, MYR

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6bppA (A:)
shndkdlstwqtfrrlwptiapfkaglivagvalilnaasdtfmlsllkpllddgfgktd
rsvlvwmplvviglmilrgitsyvssyciswvsgkvvmtmrrrlfghmmgmpvsffdkqs
tgtllsritydseqvassssgalitvvregasiiglfimmfyyswqlsiilivlapivsi
airvvskrfrnisknmqntmgqvttsaeqmlkghkevlifggqevetkrfdkvsnrmrlq
gmkmvsassisdpiiqliaslalafvlyaasfpsvmdsltagtitvvfssmialmrplks
ltnvnaqfqrgmaacqtlftildseqekdegkrvieratgdvefrnvtftypgrdvpalr
ninlkipagktvalvgrsgsgkstiaslitrfydidegeilmdghdlreytlaslrnqva
lvsqnvhlfndtvanniayarteqysreqieeaarmayamdfinkmdngldtvigengvl
lsggqrqriaiarallrdspilildeatsaldteseraiqaaldelqknrtslviahrls
tiekadeivvvedgvivergthndllehrgvyaqlhkmqfgq

    Sequence, based on observed residues (ATOM records): (download) 
    >6bppA (A:)
dkdlstwqtfrrlwptiapfkaglivagvalilnaasdtfmlsllkpllddgfgktdrsv
lvwmplvviglmilrgitsyvssyciswvsgkvvmtmrrrlfghmmgmpvsffdkqstgt
llsritydseqvassssgalitvvregasiiglfimmfyyswqlsiilivlapivsiair
vvskrfrnisknmqntmgqvttsaeqmlkghkevlifggqevetkrfdkvsnrmrlqgmk
mvsassisdpiiqliaslalafvlyaasfpsvmdsltagtitvvfssmialmrplksltn
vnaqfqrgmaacqtlftildseqekdegkrvieratgdvefrnvtftypgrdvpalrnin
lkipagktvalvgrsgsgkstiaslitrfydidegeilmdghdlreytlaslrnqvalvs
qnvhlfndtvanniayarteqysreqieeaarmayamdfinkmdngldtvigengvllsg
gqrqriaiarallrdspilildeatsaldteseraiqaaldelqknrtslviahrlstie
kadeivvvedgvivergthndllehrgvyaqlhkmq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6bppB (B:)
shndkdlstwqtfrrlwptiapfkaglivagvalilnaasdtfmlsllkpllddgfgktd
rsvlvwmplvviglmilrgitsyvssyciswvsgkvvmtmrrrlfghmmgmpvsffdkqs
tgtllsritydseqvassssgalitvvregasiiglfimmfyyswqlsiilivlapivsi
airvvskrfrnisknmqntmgqvttsaeqmlkghkevlifggqevetkrfdkvsnrmrlq
gmkmvsassisdpiiqliaslalafvlyaasfpsvmdsltagtitvvfssmialmrplks
ltnvnaqfqrgmaacqtlftildseqekdegkrvieratgdvefrnvtftypgrdvpalr
ninlkipagktvalvgrsgsgkstiaslitrfydidegeilmdghdlreytlaslrnqva
lvsqnvhlfndtvanniayarteqysreqieeaarmayamdfinkmdngldtvigengvl
lsggqrqriaiarallrdspilildeatsaldteseraiqaaldelqknrtslviahrls
tiekadeivvvedgvivergthndllehrgvyaqlhkmqfgq

    Sequence, based on observed residues (ATOM records): (download) 
    >6bppB (B:)
stwqtfrrlwptiapfkaglivagvalilnaasdtfmlsllkpllddgfgktdrsvlvwm
plvviglmilrgitsyvssyciswvsgkvvmtmrrrlfghmmgmpvsffdkqstgtllsr
itydseqvassssgalitvvregasiiglfimmfyyswqlsiilivlapivsiairvvsn
tmgqvttsaeqmlkghkevlifggqevetkrfdkvsnrmrlqgmkmvsassisdpiiqli
aslalafvlyaasfpsvmdsltagtitvvfssmialmrplksltnvnaqfqrgmaacqtl
ftildseqekdegkrvieratgdvefrnvtftypgrdvpalrninlkipagktvalvgrs
gsgkstiaslitrfydidegeilmdghdlreytlaslrnqvalvsqnvhlfndtvannia
yarteqysreqieeaarmayamdfinkmdngldtvigengvllsggqrqriaiarallrd
spilildeatsaldteseraiqaaldelqknrtslviahrlstiekadeivvvedgvive
rgthndllehrgvyaqlhkmq