PDB entry 6blq
View 6blq on RCSB PDB site
Description: Crystal Structure of IAg7 in complex with insulin mimotope p8E9E
Class: immune system
Keywords: insulin, type I diabetes, t cell, autoimmune disease, immune system
Deposited on
2017-11-11, released
2017-12-20
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-07-04.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.45
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: H-2 class II histocompatibility antigen, A-D alpha chain
Species: Mus musculus [TaxId:10090]
Gene: H2-Aa
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6blqa1, d6blqa2 - Chain 'B':
Compound: H2-Ab1 protein
Species: Mus musculus [TaxId:10090]
Gene: H2-Ab1
Database cross-references and differences (RAF-indexed):
- Uniprot Q31135 (27-End)
- see remark 999 (0-12)
- linker (13-17)
- linker (25-26)
- Heterogens: NAG, IPA, EDO, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6blqA (A:)
eddieadhvgfygttvyqspgdigqythefdgdelfyvdldkkktvwrlpefgqlilfep
qgglqniaaekhnlgiltkrsnftpatneapqatvfpkspvllgqpntlicfvdnifppv
initwlrnsksvtdgvyetsflvnrdhsfhklsyltfipsdddiydckvehwgleepvlk
hwepe
Sequence, based on observed residues (ATOM records): (download)
>6blqA (A:)
eddieadhvgfygttvyqspgdigqythefdgdelfyvdldkkktvwrlpefgqlilfep
qgglqniaaekhnlgiltkrsnftpatneapqatvfpkspvllgqpntlicfvdnifppv
initwlrnsksvtdgvyetsflvnrdhsfhklsyltfipsdddiydckvehwgleepvlk
hwep
- Chain 'B':
No sequence available.