PDB entry 6bkn

View 6bkn on RCSB PDB site
Description: Crystal structure of the A/Wyoming/3/2003 (H3N2) influenza virus hemagglutinin apo form
Class: viral protein
Keywords: Influenza, Hemagglutinin, Receptor, VIRAL PROTEIN
Deposited on 2017-11-09, released 2018-02-28
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: N/A
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:430416]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
    • Uniprot A4GYF9 (4-End)
      • expression tag (2-3)
      • engineered mutation (212)
    Domains in SCOPe 2.08: d6bkna1, d6bkna2
  • Chain 'B':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:518976]
    Gene: HA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6bknb_
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6bknA (A:)
adpgatlclghhavpngtivktitndqievtnatelvqssstggicdsphqildgenctl
idallgdpqcdgfqnkkwdlfverskaysncypydvpdyaslrslvassgtlefnnesfn
wagvtqngtssackrrsnksffsrlnwlthlkykypalnvtmpnnekfdklyiwgvhhpv
tdsdqislyaqasgritvstkrsqqtvipnigfrprvrdissrisiywtivkpgdillin
stgnliaprgyfkirsgkssimrsdapigkcnsecitpngsipndkpfqnvnritygacp
ryvkqntlklatgmrnvpekqtr

    Sequence, based on observed residues (ATOM records): (download) 
    >6bknA (A:)
pgatlclghhavpngtivktitndqievtnatelvqssstggicdsphqildgenctlid
allgdpqcdgfqnkkwdlfverskaysncypydvpdyaslrslvassgtlefnnesfnwa
gvtqngtssackrrsnksffsrlnwlthlkykypalnvtmpnnekfdklyiwgvhhpvtd
sdqislyaqasgritvstkrsqqtvipnigfrprvrdissrisiywtivkpgdillinst
gnliaprgyfkirsgkssimrsdapigkcnsecitpngsipndkpfqnvnritygacpry
vkqntlklatgmrnvpe

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6bknB (B:)
gifgaiagfiengwegmvdgwygfrhqnsegtgqaadlkstqaainqingklnrligktn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdsemnklfe
rtkkqlrenaedmgngcfkiyhkcdnaciesirngtydhdvyrdealnnrfqik

    Sequence, based on observed residues (ATOM records): (download) 
    >6bknB (B:)
gifgaiagfiengwegmvdgwygfrhqnsegtgqaadlkstqaainqingklnrligktn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdsemnklfe
rtkkqlrenaedmgngcfkiyhkcdnaciesirngtydhdvyrdealnnrfqi