PDB entry 6b6z

View 6b6z on RCSB PDB site
Description: Crystal structure of the Apo Antibody fragment (Fab) raised against C-terminal domain of Ebola nucleoprotein (EBOV, TAFV, BDBV strains)
Class: immune system
Keywords: fab, antibody, ebola, nucleoprotein, IMMUNE SYSTEM
Deposited on 2017-10-03, released 2018-12-19
The last revision prior to the SCOPe 2.07 freeze date was dated 2018-12-19, with a file datestamp of 2018-12-14.
Experiment type: XRAY
Resolution: 2.11 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Apo Fab Light Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6B6Z
    Domains in SCOPe 2.07: d6b6za1, d6b6za2
  • Chain 'B':
    Compound: Apo Fab Heavy Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6B6Z
  • Chain 'C':
    Compound: Apo Fab Light Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6B6Z
    Domains in SCOPe 2.07: d6b6zc1, d6b6zc2
  • Chain 'D':
    Compound: Apo Fab Heavy Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6B6Z
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6b6zA (A:)
    sdiqmtqspsslsasvgdrvtitcrasqsvssavawyqqkpgkapklliysasslysgvp
    srfsgsrsgtdftltisslqpedfatyycqqysyslvtfgqgtkveikrtvaapsvfifp
    psdsqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
    tlskadyekhkvyacevthqglsspvtksfnrgec
    

    Sequence, based on observed residues (ATOM records): (download)
    >6b6zA (A:)
    tqspsslsasvgdrvtitcrasqsvssavawyqqkpgkapklliyssrfsgsrsgtdftl
    tisslqpedfatyycqqysyslvtfgqgtkveikrtvaapsvfifppsdsqlksgtasvv
    cllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltlskadyekhkvya
    cevthqglsspvtksfnrge
    

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >6b6zC (C:)
    sdiqmtqspsslsasvgdrvtitcrasqsvssavawyqqkpgkapklliysasslysgvp
    srfsgsrsgtdftltisslqpedfatyycqqysyslvtfgqgtkveikrtvaapsvfifp
    psdsqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
    tlskadyekhkvyacevthqglsspvtksfnrgec
    

    Sequence, based on observed residues (ATOM records): (download)
    >6b6zC (C:)
    tqspsslsasvgdrvtitcrasqsvssavawyqqkpgkapklliysrfsgsrsgtdftlt
    isslqpedfatyycqqysyslvtfgqgtkveikrtvaapsvfifppsdsqlksgtasvvc
    llnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltlskadyekhkvyac
    evthqglsspvtksfnrg
    

  • Chain 'D':
    No sequence available.