PDB entry 6b55

View 6b55 on RCSB PDB site
Description: Crystal structure of the Plant Defensin NaD1 complexed with phosphatidic acid
Class: antimicrobial protein
Keywords: antimicrobial, antifungal, defensin, PLANT PROTEIN, ANTIMICROBIAL PROTEIN
Deposited on 2017-09-28, released 2018-05-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: flower-specific defensin
    Species: Nicotiana alata [TaxId:4087]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b55a_
  • Chain 'B':
    Compound: flower-specific defensin
    Species: Nicotiana alata [TaxId:4087]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b55b_
  • Chain 'C':
    Compound: flower-specific defensin
    Species: Nicotiana alata [TaxId:4087]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b55c_
  • Chain 'D':
    Compound: flower-specific defensin
    Species: Nicotiana alata [TaxId:4087]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b55d_
  • Chain 'E':
    Compound: flower-specific defensin
    Species: Nicotiana alata [TaxId:4087]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b55e_
  • Chain 'F':
    Compound: flower-specific defensin
    Species: Nicotiana alata [TaxId:4087]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b55f_
  • Chain 'G':
    Compound: flower-specific defensin
    Species: Nicotiana alata [TaxId:4087]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b55g_
  • Chain 'H':
    Compound: flower-specific defensin
    Species: Nicotiana alata [TaxId:4087]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b55h_
  • Chain 'I':
    Compound: flower-specific defensin
    Species: Nicotiana alata [TaxId:4087]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b55i_
  • Chain 'J':
    Compound: flower-specific defensin
    Species: Nicotiana alata [TaxId:4087]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b55j_
  • Chain 'K':
    Compound: flower-specific defensin
    Species: Nicotiana alata [TaxId:4087]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b55k_
  • Chain 'L':
    Compound: flower-specific defensin
    Species: Nicotiana alata [TaxId:4087]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b55l_
  • Chain 'M':
    Compound: flower-specific defensin
    Species: Nicotiana alata [TaxId:4087]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b55m_
  • Chain 'N':
    Compound: flower-specific defensin
    Species: Nicotiana alata [TaxId:4087]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b55n_
  • Chain 'O':
    Compound: flower-specific defensin
    Species: Nicotiana alata [TaxId:4087]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b55o_
  • Chain 'P':
    Compound: flower-specific defensin
    Species: Nicotiana alata [TaxId:4087]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b55p_
  • Chain 'Q':
    Compound: flower-specific defensin
    Species: Nicotiana alata [TaxId:4087]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b55q_
  • Chain 'R':
    Compound: flower-specific defensin
    Species: Nicotiana alata [TaxId:4087]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b55r_
  • Chain 'S':
    Compound: flower-specific defensin
    Species: Nicotiana alata [TaxId:4087]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b55s_
  • Chain 'T':
    Compound: flower-specific defensin
    Species: Nicotiana alata [TaxId:4087]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b55t_
  • Heterogens: PA8, PO4, PGE, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6b55A (A:)
    arecktesntfpgicitkppcrkacisekftdghcskilrrclctkpc
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6b55B (B:)
    arecktesntfpgicitkppcrkacisekftdghcskilrrclctkpc
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6b55C (C:)
    arecktesntfpgicitkppcrkacisekftdghcskilrrclctkpc
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6b55D (D:)
    arecktesntfpgicitkppcrkacisekftdghcskilrrclctkpc
    

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6b55E (E:)
    arecktesntfpgicitkppcrkacisekftdghcskilrrclctkpc
    

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6b55F (F:)
    arecktesntfpgicitkppcrkacisekftdghcskilrrclctkpc
    

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6b55G (G:)
    arecktesntfpgicitkppcrkacisekftdghcskilrrclctkpc
    

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6b55H (H:)
    arecktesntfpgicitkppcrkacisekftdghcskilrrclctkpc
    

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6b55I (I:)
    arecktesntfpgicitkppcrkacisekftdghcskilrrclctkpc
    

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6b55J (J:)
    arecktesntfpgicitkppcrkacisekftdghcskilrrclctkpc
    

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6b55K (K:)
    arecktesntfpgicitkppcrkacisekftdghcskilrrclctkpc
    

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6b55L (L:)
    arecktesntfpgicitkppcrkacisekftdghcskilrrclctkpc
    

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6b55M (M:)
    arecktesntfpgicitkppcrkacisekftdghcskilrrclctkpc
    

  • Chain 'N':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6b55N (N:)
    arecktesntfpgicitkppcrkacisekftdghcskilrrclctkpc
    

  • Chain 'O':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6b55O (O:)
    arecktesntfpgicitkppcrkacisekftdghcskilrrclctkpc
    

  • Chain 'P':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6b55P (P:)
    arecktesntfpgicitkppcrkacisekftdghcskilrrclctkpc
    

  • Chain 'Q':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6b55Q (Q:)
    arecktesntfpgicitkppcrkacisekftdghcskilrrclctkpc
    

  • Chain 'R':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6b55R (R:)
    arecktesntfpgicitkppcrkacisekftdghcskilrrclctkpc
    

  • Chain 'S':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6b55S (S:)
    arecktesntfpgicitkppcrkacisekftdghcskilrrclctkpc
    

  • Chain 'T':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6b55T (T:)
    arecktesntfpgicitkppcrkacisekftdghcskilrrclctkpc