PDB entry 6ayz

View 6ayz on RCSB PDB site
Description: Crystal structure of Asf1-Fab 12E complex
Class: immune system
Keywords: Antibody, Complex, Asf1, Crystal Chaperone, IMMUNE SYSTEM
Deposited on 2017-09-08, released 2018-01-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: histone chaperone asf1
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: ASF1, CIA1, YJL115W, J0755
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ayza_
  • Chain 'B':
    Compound: Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6AYZ
    Domains in SCOPe 2.08: d6ayzb_
  • Chain 'C':
    Compound: Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6AYZ (Start-214)
    Domains in SCOPe 2.08: d6ayzc1, d6ayzc2
  • Chain 'D':
    Compound: Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6AYZ
    Domains in SCOPe 2.08: d6ayzd1, d6ayzd2
  • Chain 'M':
    Compound: histone chaperone asf1
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: ASF1, CIA1, YJL115W, J0755
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ayzm_
  • Chain 'R':
    Compound: Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6AYZ (Start-223)
    Domains in SCOPe 2.08: d6ayzr_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6ayzA (A:)
gsivsllgikvlnnpakftdpyefeitfecleslkhdlewkltyvgssrsldhdqeldsi
lvgpvpvgvnkfvfsadppsaelipaselvsvtvillscsydgrefvrvgyyvnneydee
elrenppakvqvdhivrnilaekprvtrfnivwd

    Sequence, based on observed residues (ATOM records): (download) 
    >6ayzA (A:)
sivsllgikvlnnpakftdpyefeitfeckhdlewkltyvgssrsldhdqeldsilvgpv
pvgvnkfvfsadppsaelipaselvsvtvillscsydgrefvrvgyyvnneydeeelren
ppakvqvdhivrnilaekprvtrfnivwd

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6ayzB (B:)
eisevqlvesggglvqpggslrlscaasgfnvsyysihwvrqapgkglewvasiypyygs
tsyadsvkgrftisadtskntaylqmnslraedtavyycargygwaldywgqgtlvtvss
astkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqss
glyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscd

    Sequence, based on observed residues (ATOM records): (download) 
    >6ayzB (B:)
sevqlvesggglvqpggslrlscaasgfnvsyysihwvrqapgkglewvasiypyygsts
yadsvkgrftisadtskntaylqmnslraedtavyycargygwaldywgqgtlvtvssas
tkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgl
yslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepks

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6ayzC (C:)
sdiqmtqspsslsasvgdrvtitcrasqsvssavawyqqkpgkapklliysasslysgvp
srfsgsrsgtdftltisslqpedfatyycqqdgwslitfgqgtkveikrtvaapsvfifp
psdsqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >6ayzC (C:)
iqmtqspsslsasvgdrvtitcrasqsvssavawyqqkpgkapklliysasslysgvpsr
fsgsrsgtdftltisslqpedfatyycqqdgwslitfgqgtkveikrtvaapsvfifpps
dsqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltl
skadyekhkvyacevthqglsspvtksfnrgec

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6ayzD (D:)
sdiqmtqspsslsasvgdrvtitcrasqsvssavawyqqkpgkapklliysasslysgvp
srfsgsrsgtdftltisslqpedfatyycqqdgwslitfgqgtkveikrtvaapsvfifp
psdsqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >6ayzD (D:)
iqmtqspsslsasvgdrvtitcrasqsvssavawyqqkpgkapklliysasslysgvpsr
fsgsrsgtdftltisslqpedfatyycqqdgwslitfgqgtkveikrtvaapsvfifpps
dsqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltl
skadyekhkvyacevthqglsspvtksfnrg

  • Chain 'M':
    Sequence, based on SEQRES records: (download) 
    >6ayzM (M:)
gsivsllgikvlnnpakftdpyefeitfecleslkhdlewkltyvgssrsldhdqeldsi
lvgpvpvgvnkfvfsadppsaelipaselvsvtvillscsydgrefvrvgyyvnneydee
elrenppakvqvdhivrnilaekprvtrfnivwd

    Sequence, based on observed residues (ATOM records): (download) 
    >6ayzM (M:)
sivsllgikvlnnpakftdpyefeitfecleslkhdlewkltyvgssrsldhdqeldsil
vgpvpvgvnkfvfsadppsaelipaselvsvtvillscsydgrefvrvgyyvnneydeee
lrenppakvqvdhivrnilaekprvtrfnivw

  • Chain 'R':
    Sequence, based on SEQRES records: (download) 
    >6ayzR (R:)
eisevqlvesggglvqpggslrlscaasgfnvsyysihwvrqapgkglewvasiypyygs
tsyadsvkgrftisadtskntaylqmnslraedtavyycargygwaldywgqgtlvtvss
astkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqss
glyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscd

    Sequence, based on observed residues (ATOM records): (download) 
    >6ayzR (R:)
evqlvesggglvqpggslrlscaasgfnvsyysihwvrqapgkglewvasiypyygstsy
adsvkgrftisadtskntaylqmnslraedtavyycargygwaldywgqgtlvtvssast
kgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgly
slssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscd