PDB entry 6aov
View 6aov on RCSB PDB site
Description: Crystal structure of the A/Brisbane/10/2007 (H3N2) influenza virus hemagglutinin in complex with 6'-SLNLN
Class: viral protein
Keywords: Influenza A virus, hemagglutinin, mutant, receptor binding, antigenicity, VIRAL PROTEIN
Deposited on
2017-08-16, released
2017-10-18
The last revision prior to the SCOPe 2.07 freeze date was dated
2017-11-08, with a file datestamp of
2017-11-03.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.38
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Hemagglutinin HA1 chain
Species: Influenza A virus [TaxId:476294]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Uniprot A8W891 (4-End)
- expression tag (2-3)
- variant (187)
Domains in SCOPe 2.07: d6aova1, d6aova2 - Chain 'B':
Compound: Hemagglutinin HA2 chain
Species: Influenza A virus (A/Brisbane/10/2007(H3N2)) [TaxId:476294]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d6aovb_ - Heterogens: NAG, BMA, MAN, SIA, GAL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6aovA (A:)
anpgatlclghhavpngtivktitndqievtnatelvqssstgeicdsphqildgenctl
idallgdpqcdgfqnkkwdlfverskaysncypydvpdyaslrslvassgtlefnnesfn
wtgvtqngtssacirrsnnsffsrlnwlthlkfkypalnvtmpnnekfdklyiwgvhhpg
tdndqiflyaqasgritvstkrsqqtvipnigsrprvrnipsrisiywtivkpgdillin
stgnliaprgyfkirsgkssimrsdapigkcnsecitpngsipndkpfqnvnritygacp
ryvkqntlklatgmrnvpekqtr
Sequence, based on observed residues (ATOM records): (download)
>6aovA (A:)
pgatlclghhavpngtivktitndqievtnatelvqssstgeicdsphqildgenctlid
allgdpqcdgfqnkkwdlfverskaysncypydvpdyaslrslvassgtlefnnesfnwt
gvtqngtssacirrsnnsffsrlnwlthlkfkypalnvtmpnnekfdklyiwgvhhpgtd
ndqiflyaqasgritvstkrsqqtvipnigsrprvrnipsrisiywtivkpgdillinst
gnliaprgyfkirsgkssimrsdapigkcnsecitpngsipndkpfqnvnritygacpry
vkqntlklatgmrnvpe
- Chain 'B':
Sequence, based on SEQRES records: (download)
>6aovB (B:)
gifgaiagfiengwegmvdgwygfrhqnsegigqaadlkstqaaidqingklnrligktn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdsemnklfe
ktkkqlrenaedmgngcfkiyhkcdnacigsirngtydhdvyrdealnnrfqik
Sequence, based on observed residues (ATOM records): (download)
>6aovB (B:)
gifgaiagfiengwegmvdgwygfrhqnsegigqaadlkstqaaidqingklnrligktn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdsemnklfe
ktkkqlrenaedmgngcfkiyhkcdnacigsirngtydhdvyrdealnnrfqi