PDB entry 6akt
View 6akt on RCSB PDB site
Description: Cryo-EM structure of CVA10 A-particle
Class: virus
Keywords: picornavirus uncoating, receptor binding, VIRUS
Deposited on
2018-09-03, released
2019-01-16
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-01-16, with a file datestamp of
2019-01-11.
Experiment type: EM
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.17
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: vp1
Species: Coxsackievirus A10 [TaxId:42769]
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: vp2
Species: Coxsackievirus A10 [TaxId:42769]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6aktb_ - Chain 'C':
Compound: vp3
Species: Coxsackievirus A10 [TaxId:42769]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6aktc_
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence, based on SEQRES records: (download)
>6aktB (B:)
spsveacgysdrvaqltvgnssittqeaanivlaygewpeycpdtdatavdkptrpdvsv
nrfytldskmwqenstgwywkfpdvlnktgvfgqnaqfhylyrsgfclhvqcnaskfhqg
allvavipefviagrgsntkpneaphpgftttfpgttgatfhdpyvldsgvplsqaliyp
hqwinlrtnncatvivpyinavpfdsainhsnfglivipvsplkyssgattaipititia
plnsefgglrqavsq
Sequence, based on observed residues (ATOM records): (download)
>6aktB (B:)
aqltvgnssittqeaanivlaygewpeycpdtdatavdkptrpdvsvnrfytldskmwqe
nstgwywkfpdvlnktgvfgqnaqfhylyrsgfclhvqcnaskfhqgallvavipefvia
grgeaphpgftttfpgttgatfhdpyvldsgvplsqaliyphqwinlrtnncatvivpyi
navpfdsainhsnfglivipvsplkyssgattaipititiaplnsefgglr
- Chain 'C':
Sequence, based on SEQRES records: (download)
>6aktC (C:)
gipaelrpgtnqflttdddtaapilpgftptptihipgevhsllelcrvetilevnntte
atgltrllipvssqnkadelcaafmvdpgrigpwqstlvgqicryytqwsgslkvtfmft
gsfmatgkmlvaysppgsaqpanretamlgthviwdfglqssvslvipwisnthfrtakt
ggnydyytagvvtlwyqtnyvvppetpgeayiiamgadlykftlkickdtdevtqqavlq
Sequence, based on observed residues (ATOM records): (download)
>6aktC (C:)
gipaelrpgtnqflttdddtaapilpgftptptihipgevhsllelcrvetilevnntte
atgltrllipvssqnkadelcaafmvdpgrigpwqstlvgqicryytqwsgslkvtfmft
gsfmatgkmlvaysppgsaqpanretamlgthviwdfglqssvslvipwisnthnydyyt
agvvtlwyqtnyvvppetpgeayiiamgadlykftlkickdtdevtq