PDB entry 5zg4

View 5zg4 on RCSB PDB site
Description: Crystal Structure of Triosephosphate isomerase SAD deletion mutant from Opisthorchis viverrini
Class: isomerase
Keywords: Tim-barrel, Triosephosphate isomerase, ISOMERASE
Deposited on 2018-03-07, released 2018-10-24
The last revision prior to the SCOPe 2.07 freeze date was dated 2018-10-24, with a file datestamp of 2018-10-19.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: triosephosphate isomerase
    Species: Opisthorchis viverrini [TaxId:6198]
    Gene: T265_10017
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A074Z863 (Start-268)
      • conflict (65)
      • conflict (123)
      • conflict (210)
      • conflict (222)
    Domains in SCOPe 2.07: d5zg4a_
  • Chain 'B':
    Compound: triosephosphate isomerase
    Species: Opisthorchis viverrini [TaxId:6198]
    Gene: T265_10017
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A074Z863 (Start-268)
      • conflict (65)
      • conflict (123)
      • conflict (210)
      • conflict (222)
    Domains in SCOPe 2.07: d5zg4b_
  • Chain 'C':
    Compound: triosephosphate isomerase
    Species: Opisthorchis viverrini [TaxId:6198]
    Gene: T265_10017
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A074Z863 (Start-268)
      • conflict (65)
      • conflict (123)
      • conflict (210)
      • conflict (222)
    Domains in SCOPe 2.07: d5zg4c_
  • Chain 'D':
    Compound: triosephosphate isomerase
    Species: Opisthorchis viverrini [TaxId:6198]
    Gene: T265_10017
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A074Z863 (Start-268)
      • conflict (65)
      • conflict (123)
      • conflict (210)
      • conflict (222)
    Domains in SCOPe 2.07: d5zg4d_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5zg4A (A:)
    mgsshhhhhhssglvprgshmptdrkffvggnwkmngskkendkliemlthakidpntev
    lvappalylpsvrekldkrfhvaaqncykvpsgaftgevspamlkdvgcdwvilghserr
    hilletdqlvgektnhaisagvnviacigekleereagkteevcfrqmeairknlsmwnh
    iviayepvwaigtgktateqqaqevhlavrrwmeekvspavaksiriiyggsvtaancrt
    lakqpdvdgflvggaslkpdfieicnana
    

    Sequence, based on observed residues (ATOM records): (download)
    >5zg4A (A:)
    rkffvggnwkmngskkendkliemlthakidpntevlvappalylpsvrekldkrfhvaa
    qncykvpsgaftgevspamlkdvgcdwvilghserrhilletdqlvgektnhaisagvnv
    iacigekleereagkteevcfrqmeairknlsmwnhiviayepvwaigtgktateqqaqe
    vhlavrrwmeekvspavaksiriiyggsvtaancrtlakqpdvdgflvggaslkpdfiei
    cnana
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >5zg4B (B:)
    mgsshhhhhhssglvprgshmptdrkffvggnwkmngskkendkliemlthakidpntev
    lvappalylpsvrekldkrfhvaaqncykvpsgaftgevspamlkdvgcdwvilghserr
    hilletdqlvgektnhaisagvnviacigekleereagkteevcfrqmeairknlsmwnh
    iviayepvwaigtgktateqqaqevhlavrrwmeekvspavaksiriiyggsvtaancrt
    lakqpdvdgflvggaslkpdfieicnana
    

    Sequence, based on observed residues (ATOM records): (download)
    >5zg4B (B:)
    ptdrkffvggnwkmngskkendkliemlthakidpntevlvappalylpsvrekldkrfh
    vaaqncykvpsgaftgevspamlkdvgcdwvilghserrhilletdqlvgektnhaisag
    vnviacigekleereagkteevcfrqmeairwnhiviayepvwaigtgktateqqaqevh
    lavrrwmeekvspavaksiriiyggsvtaancrtlakqpdvdgflvggaslkpdfieicn
    ana
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >5zg4C (C:)
    mgsshhhhhhssglvprgshmptdrkffvggnwkmngskkendkliemlthakidpntev
    lvappalylpsvrekldkrfhvaaqncykvpsgaftgevspamlkdvgcdwvilghserr
    hilletdqlvgektnhaisagvnviacigekleereagkteevcfrqmeairknlsmwnh
    iviayepvwaigtgktateqqaqevhlavrrwmeekvspavaksiriiyggsvtaancrt
    lakqpdvdgflvggaslkpdfieicnana
    

    Sequence, based on observed residues (ATOM records): (download)
    >5zg4C (C:)
    rkffvggnwkmngskkendkliemlthakidpntevlvappalylpsvrekldkrfhvaa
    qncykvpsgaftgevspamlkdvgcdwvilghserrhilletdqlvgektnhaisagvnv
    iacigekleereagkteevcfrqmeairknlsmwnhiviayepvwaktateqqaqevhla
    vrrwmeekvspavaksiriiyggsvtaancrtlakqpdvdgflvggaslkpdfieicnan
    a
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >5zg4D (D:)
    mgsshhhhhhssglvprgshmptdrkffvggnwkmngskkendkliemlthakidpntev
    lvappalylpsvrekldkrfhvaaqncykvpsgaftgevspamlkdvgcdwvilghserr
    hilletdqlvgektnhaisagvnviacigekleereagkteevcfrqmeairknlsmwnh
    iviayepvwaigtgktateqqaqevhlavrrwmeekvspavaksiriiyggsvtaancrt
    lakqpdvdgflvggaslkpdfieicnana
    

    Sequence, based on observed residues (ATOM records): (download)
    >5zg4D (D:)
    ptdrkffvggnwkmngskkendkliemlthakidpntevlvappalylpsvrekldkrfh
    vaaqncykvpsgaftgevspamlkdvgcdwvilghserrhilletdqlvgektnhaisag
    vnviacigekleereagkteevcfrqmeairkhiviayepvwaigtgktateqqaqevhl
    avrrwmeekvspavaksiriiyggsvtaancrtlakqpdvdgflvggaslkpdfieicna
    na