PDB entry 5zfx

View 5zfx on RCSB PDB site
Description: Crystal Structure of Triosephosphate isomerase from Opisthorchis viverrini
Class: isomerase
Keywords: Tim-barrel, Triosephosphate isomerase, ISOMERASE
Deposited on 2018-03-07, released 2018-10-24
The last revision prior to the SCOPe 2.07 freeze date was dated 2018-10-24, with a file datestamp of 2018-10-19.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: triosephosphate isomerase
    Species: Opisthorchis viverrini [TaxId:6198]
    Gene: T265_10017
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A074Z863 (Start-271)
      • conflict (65)
      • conflict (123)
      • conflict (213)
      • conflict (225)
    Domains in SCOPe 2.07: d5zfxa_
  • Chain 'B':
    Compound: triosephosphate isomerase
    Species: Opisthorchis viverrini [TaxId:6198]
    Gene: T265_10017
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A074Z863 (Start-271)
      • conflict (65)
      • conflict (123)
      • conflict (213)
      • conflict (225)
    Domains in SCOPe 2.07: d5zfxb_
  • Chain 'C':
    Compound: triosephosphate isomerase
    Species: Opisthorchis viverrini [TaxId:6198]
    Gene: T265_10017
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A074Z863 (Start-271)
      • conflict (65)
      • conflict (123)
      • conflict (213)
      • conflict (225)
    Domains in SCOPe 2.07: d5zfxc_
  • Chain 'D':
    Compound: triosephosphate isomerase
    Species: Opisthorchis viverrini [TaxId:6198]
    Gene: T265_10017
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A074Z863 (Start-271)
      • conflict (65)
      • conflict (123)
      • conflict (213)
      • conflict (225)
    Domains in SCOPe 2.07: d5zfxd_
  • Heterogens: MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5zfxA (A:)
mgsshhhhhhssglvprgshmptdrkffvggnwkmngskkendkliemlthakidpntev
lvappalylpsvrekldkrfhvaaqncykvpsgaftgevspamlkdvgcdwvilghserr
hilletdqlvgektnhaisagvnviacigekleereagkteevcfrqmeairknlssadm
wnhiviayepvwaigtgktateqqaqevhlavrrwmeekvspavaksiriiyggsvtaan
crtlakqpdvdgflvggaslkpdfieicnana

    Sequence, based on observed residues (ATOM records): (download) 
    >5zfxA (A:)
rkffvggnwkmngskkendkliemlthakidpntevlvappalylpsvrekldkrfhvaa
qncykvpsgaftgevspamlkdvgcdwvilghserrhilletdqlvgektnhaisagvnv
iacigekleereagkteevcfrqmeairknlssadmwnhiviayepvwaktateqqaqev
hlavrrwmeekvspavaksiriiyggsvtaancrtlakqpdvdgflvggaslkpdfieic
nana

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5zfxB (B:)
mgsshhhhhhssglvprgshmptdrkffvggnwkmngskkendkliemlthakidpntev
lvappalylpsvrekldkrfhvaaqncykvpsgaftgevspamlkdvgcdwvilghserr
hilletdqlvgektnhaisagvnviacigekleereagkteevcfrqmeairknlssadm
wnhiviayepvwaigtgktateqqaqevhlavrrwmeekvspavaksiriiyggsvtaan
crtlakqpdvdgflvggaslkpdfieicnana

    Sequence, based on observed residues (ATOM records): (download) 
    >5zfxB (B:)
rkffvggnwkmngskkendkliemlthakidpntevlvappalylpsvrekldkrfhvaa
qncykvpsgaftgevspamlkdvgcdwvilghserrhilletdqlvgektnhaisagvnv
iacigekleereagkteevcfrqmeairknlssadmwnhiviayepvwaigtgktateqq
aqevhlavrrwmeekvspavaksiriiyggsvtaancrtlakqpdvdgflvggaslkpdf
ieicnana

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5zfxC (C:)
mgsshhhhhhssglvprgshmptdrkffvggnwkmngskkendkliemlthakidpntev
lvappalylpsvrekldkrfhvaaqncykvpsgaftgevspamlkdvgcdwvilghserr
hilletdqlvgektnhaisagvnviacigekleereagkteevcfrqmeairknlssadm
wnhiviayepvwaigtgktateqqaqevhlavrrwmeekvspavaksiriiyggsvtaan
crtlakqpdvdgflvggaslkpdfieicnana

    Sequence, based on observed residues (ATOM records): (download) 
    >5zfxC (C:)
rkffvggnwkmngskkendkliemlthakidpntevlvappalylpsvrekldkrfhvaa
qncykvpsgaftgevspamlkdvgcdwvilghserrhilletdqlvgektnhaisagvnv
iacigekleereagkteevcfrqmeairknlssadmwnhiviayepvwatateqqaqevh
lavrrwmeekvspavaksiriiyggsvtaancrtlakqpdvdgflvggaslkpdfieicn
ana

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5zfxD (D:)
mgsshhhhhhssglvprgshmptdrkffvggnwkmngskkendkliemlthakidpntev
lvappalylpsvrekldkrfhvaaqncykvpsgaftgevspamlkdvgcdwvilghserr
hilletdqlvgektnhaisagvnviacigekleereagkteevcfrqmeairknlssadm
wnhiviayepvwaigtgktateqqaqevhlavrrwmeekvspavaksiriiyggsvtaan
crtlakqpdvdgflvggaslkpdfieicnana

    Sequence, based on observed residues (ATOM records): (download) 
    >5zfxD (D:)
rkffvggnwkmngskkendkliemlthakidpntevlvappalylpsvrekldkrfhvaa
qncykvpsgaftgevspamlkdvgcdwvilghserrhilletdqlvgektnhaisagvnv
iacigekleereagkteevcfrqmeairknlssadmwnhiviayepvwatateqqaqevh
lavrrwmeekvspavaksiriiyggsvtaancrtlakqpdvdgflvggaslkpdfieicn
ana