PDB entry 5yqw

View 5yqw on RCSB PDB site
Description: Structure and function of a novel periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria
Class: protein binding
Keywords: chitooligosaccharide-binding protein, Vibrio harveyi, PROTEIN BINDING
Deposited on 2017-11-08, released 2018-02-21
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-02.
Experiment type: XRAY
Resolution: 1.36 Å
R-factor: N/A
AEROSPACI score: 0.63 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peptide ABC transporter, periplasmic peptide-binding protein
    Species: Vibrio harveyi (strain 1DA3) [TaxId:673519]
    Gene: VME_26970
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5yqwa_
  • Heterogens: P4G, NI, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5yqwA (A:)
aerseltihpkefttfvrnfnpflgatnlhtttdfiyeplvvfnemhgntpvfrlaenfq
msddlmsvtfdirkgvkwsdgeaftaddvvysfnlvkekpeldqsginswvtgvekvndy
qvkfrlseansnvpyeiakvpvvpkhvwskvkdpstftnenpvgsgpftvidtftpqlyi
qcenpnywdaanldvdclrvpqianndqflgkvvngemdwtssfvpdidrtyaaaspkhh
ywyppagtqafvvnfknpdaaknealtnvdfrrafsmaldrqtiidiafygggtvndfas
glgyafeawsdekthdkfkaynsynaegakkllakagfkdvnkdgfvdtpsgksfelliq
spngwtdfnntvqlaveqlaevgikarartpdfsvynqamlegtydvaytnyfhgadpyt
ywnsaynsalqsgdgmprfamhfyknekldgllnsfyktadkqeqleiahgiqqiiaqdq
vtipvlsgaymyqynttrftgwwneenpkgrpniwagiperllhvldlkpvk