PDB entry 5ykj
View 5ykj on RCSB PDB site
Description: Structural basis of the thiol resolving mechanism in yeast mitochondrial 1-Cys peroxiredoxin via glutathione/thioredoxin systems
Class: transferase
Keywords: Saccharomyces cerevisiae, 1-Cys Peroxiredoxin, Thioredoxin, glutathione, TRANSFERASE
Deposited on
2017-10-14, released
2018-10-24
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-11-06, with a file datestamp of
2019-11-01.
Experiment type: XRAY
Resolution: 1.53 Å
R-factor: N/A
AEROSPACI score: 0.47
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Peroxiredoxin PRX1, mitochondrial
Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
Gene: PRX1, YBL064C, YBL0503, YBL0524
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5ykja1, d5ykja2 - Heterogens: GOL, NA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5ykjA (A:)
mlrinsdapnfdadttvgkinfydylgdswgvlfshpadftpvcttevsafaklkpefdk
rnvkliglsvedveshekwiqdikeiakvknvgfpiigdtfrnvaflydmvdaegfknin
dgslktvrsvfvidpkkkirliftypstvgrntsevlrvidalqltdkegvvtpinwqpa
ddviippsvsndeakakfgqfneikpylrftksk
Sequence, based on observed residues (ATOM records): (download)
>5ykjA (A:)
mlrinsdapnfdadttvgkinfydylgdswgvlfshpadftpvcttevsafaklkpefdk
rnvkliglsvedveshekwiqdikeiakvknvgfpiigdtfrnvaflydmvdaegfknin
dgslktvrsvfvidpkkkirliftypstvgrntsevlrvidalqltdkegvvtpinwqpa
ddviippsvsndeakakfgqfneikpylrftks