PDB entry 5yig

View 5yig on RCSB PDB site
Description: Crystal structure of Streptococcus pneumonia ParE with inhibitor
Class: antimicrobial protein
Keywords: Inhibitor, ANTIMICROBIAL PROTEIN
Deposited on 2017-10-04, released 2018-09-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-09-05, with a file datestamp of 2018-08-31.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA topoisomerase 4 subunit B
    Species: Streptococcus pneumoniae GA47502 [TaxId:760839]
    Gene: parE, SPAR98_0871
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5yiga_
  • Chain 'B':
    Compound: DNA topoisomerase 4 subunit B
    Species: Streptococcus pneumoniae GA47502 [TaxId:760839]
    Gene: parE, SPAR98_0871
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5yigb_
  • Heterogens: 54B, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5yigA (A:)
qvlegldavrkrpgmyigstdgaglhhlvweivdnavdealsgfgdridvtinkdgsltv
qdhgrgmptgmhamgiptveviftilhaggkfgqggyktsgglhgvgssvvnalsswlev
eitrdgavykqrfenggkpvttlkkigtalksktgtkvtfmpdatifsttdfkyntiser
lnesafllknvtlsltdkrtdeaiefhyen

    Sequence, based on observed residues (ATOM records): (download) 
    >5yigA (A:)
vlegldavrkrpgmyigstdgaglhhlvweivdnavdealsgfgdridvtinkdgsltvq
dhgrgmptgmhamgiptveviftilhavgssvvnalsswleveitrdgavykqrfenggk
pvttlkkigtalksktgtkvtfmpdatifsttdfkyntiserlnesafllknvtlsltdk
rtdeaiefhyen

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5yigB (B:)
qvlegldavrkrpgmyigstdgaglhhlvweivdnavdealsgfgdridvtinkdgsltv
qdhgrgmptgmhamgiptveviftilhaggkfgqggyktsgglhgvgssvvnalsswlev
eitrdgavykqrfenggkpvttlkkigtalksktgtkvtfmpdatifsttdfkyntiser
lnesafllknvtlsltdkrtdeaiefhyen

    Sequence, based on observed residues (ATOM records): (download) 
    >5yigB (B:)
qvlegldavrkrpgmyigstdgaglhhlvweivdnavdealsgfgdridvtinkdgsltv
qdhgrgmptgmhamgiptveviftilhagvgssvvnalsswleveitrdgavykqrfeng
gkpvttlkkigtalksktgtkvtfmpdatifsttdfkyntiserlnesafllknvtlslt
dkrtdeaiefhyen