PDB entry 5yhs

View 5yhs on RCSB PDB site
Description: Pyruvylated beta-D-galactosidase from Bacillus sp. HMA207, apo form
Class: hydrolase
Keywords: glycoside hydrolase, hydrolase
Deposited on 2017-09-29, released 2018-08-29
The last revision prior to the SCOPe 2.07 freeze date was dated 2018-08-29, with a file datestamp of 2018-08-24.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Pyruvylated beta-D-galactosidase
    Species: Bacillus sp. [TaxId:1409]
    Gene: ORF1119
    Database cross-references and differences (RAF-indexed):
    • PDB 5YHS (0-End)
    Domains in SCOPe 2.07: d5yhsa1, d5yhsa2
  • Chain 'B':
    Compound: Pyruvylated beta-D-galactosidase
    Species: Bacillus sp. [TaxId:1409]
    Gene: ORF1119
    Database cross-references and differences (RAF-indexed):
    • PDB 5YHS (0-End)
    Domains in SCOPe 2.07: d5yhsb1, d5yhsb2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5yhsA (A:)
    mkfphdflfgaasasyqvegawnedgkgvtnwdefskipgktyngtngdiavdhyhryke
    dvrlmaemglesyrfsiswarilptgdgkvnekgiefynnlideclkygivpfvtlyhwd
    lplplekdggwtnkrtaeafvkyaetcfkafgdrvkhwitfnetvmfcglgylkgahppg
    iqndvpkyfqathyvfyahaktvavykqlkqygeigithvflpaysvddqkeniqaanha
    neyetywyydpilkgeypsyvvqqlkekgwtpnwtveeleiikqnaeendfiglnyyqpi
    rverydmdikseehsrenstlapgnpsfdgfyrtvkmddktytkwgweispegfleglhm
    lkarygdikmyvtenglgdedpiidgeivdvprikfieahlkvmkraieeginlkgyyaw
    svidllswlngykkqygfifvdhndnlkrkkklsfhwykrvvetrgeelhhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >5yhsA (A:)
    mkfphdflfgaasasyqvegawnedgkgvtnwdefskipgktyngtngdiavdhyhryke
    dvrlmaemglesyrfsiswarilptgdgkvnekgiefynnlideclkygivpfvtlyhwd
    lplplekdggwtnkrtaeafvkyaetcfkafgdrvkhwitfnetvmfcglgylkgahppg
    iqndvpkyfqathyvfyahaktvavykqlkqygeigithvflpaysvddqkeniqaanha
    neyetywyydpilkgeypsyvvqqlkekgwtpnwtveeleiikqnaeendfiglnyyqpi
    rverydmnpsfdgfyrtvkmddweispegfleglhmlkarygdikmyvtenglgdedpii
    dgeivdvprikfieahlkvmkraieeginlkgyyawsvidllswlngykkqygfifvdhn
    dnlkrkkklsfhwykrvvetrgeelh
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >5yhsB (B:)
    mkfphdflfgaasasyqvegawnedgkgvtnwdefskipgktyngtngdiavdhyhryke
    dvrlmaemglesyrfsiswarilptgdgkvnekgiefynnlideclkygivpfvtlyhwd
    lplplekdggwtnkrtaeafvkyaetcfkafgdrvkhwitfnetvmfcglgylkgahppg
    iqndvpkyfqathyvfyahaktvavykqlkqygeigithvflpaysvddqkeniqaanha
    neyetywyydpilkgeypsyvvqqlkekgwtpnwtveeleiikqnaeendfiglnyyqpi
    rverydmdikseehsrenstlapgnpsfdgfyrtvkmddktytkwgweispegfleglhm
    lkarygdikmyvtenglgdedpiidgeivdvprikfieahlkvmkraieeginlkgyyaw
    svidllswlngykkqygfifvdhndnlkrkkklsfhwykrvvetrgeelhhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >5yhsB (B:)
    mkfphdflfgaasasyqvegawnedgkgvtnwdefskipgktyngtngdiavdhyhryke
    dvrlmaemglesyrfsiswarilptgdgkvnekgiefynnlideclkygivpfvtlyhwd
    lplplekdggwtnkrtaeafvkyaetcfkafgdrvkhwitfnetvmfcglgylkgahppg
    iqndvpkyfqathyvfyahaktvavykqlkqygeigithvflpaysvddqkeniqaanha
    neyetywyydpilkgeypsyvvqqlkekgwtpnwtveeleiikqnaeendfiglnyyqpi
    rverydmnpsfdgfyrtvkmddweispegfleglhmlkarygdikmyvtenglgdedpii
    dgeivdvprikfieahlkvmkraieeginlkgyyawsvidllswlngykkqygfifvdhn
    dnlkrkkklsfhwykrvvetrgeelh